>YLL008W DRS1 SGDID:S000003931, Chr XII from 131728-133986, Verified
           ORF, "Nucleolar DEAD-box protein required for ribosome
           assembly and function, including synthesis of 60S
           ribosomal subunits; constituent of 66S pre-ribosomal
           particles"
          Length = 752

 Score =  128 bits (321), Expect = 1e-33
 Identities = 128/502 (25%), Positives = 225/502 (44%), Gaps = 107/502 (21%)

Query: 235 WNNGGKIFILHSVMKSLFDNAFFKPTEIQSKTLEKSINDKNDIVVISKTGTGKTLTFCLP 294
           + N   + +   V+K L    + KP+ IQS T+  ++  K DI+  + TG+GKT  F +P
Sbjct: 230 YENFNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGK-DIIAGAVTGSGKTAAFMIP 288

Query: 295 XXXXXXXXXXXXXXXXXXXXXXFRCLILVPTRELALQILKHFNYINKYINLFISTI---- 350
                                  R ++L+PTRELA+Q+      + K I  F+S I    
Sbjct: 289 IIERLLYKPAKIAST--------RVIVLLPTRELAIQVAD----VGKQIARFVSGITFGL 336

Query: 351 -IGGLNLNKQKRILMKKPEILICTPGRLKYFLHLENPIKYIYQMKNIRYLVCDEIDKMIE 409
            +GGLNL +Q+++L  +P+I+I TPGR  +  H+ N     + + ++  LV DE D+M+E
Sbjct: 337 AVGGLNLRQQEQMLKSRPDIVIATPGR--FIDHIRNSAS--FNVDSVEILVMDEADRMLE 392

Query: 410 ISFMKDISYIAKHIYKSVGDKKKKLIQTFLLSATLSLTVQLQNDNMTKLLNSIIIRKDKS 469
             F  +++ I   +  +         Q  L SAT++  +        K L S+ ++K   
Sbjct: 393 EGFQDELNEIMGLLPSN--------RQNLLFSATMNSKI--------KSLVSLSLKKPVR 436

Query: 470 FIINLSNEQNVYNDNSNILPELLTLYIVKLNERDIV--CKLFYLIKSYFSYDIXXXXXXX 527
            +I          D        LT   V++ +RD +    LF LI+              
Sbjct: 437 IMI----------DPPKKAATKLTQEFVRIRKRDHLKPALLFNLIRKL------------ 474

Query: 528 XXXXXKWEHPQDTHQNDEINKIIIFVNTIKSAKQLNAIFKHLFLHNNLESSIPKKYRSNL 587
                       T Q     +I++FV   ++A +L  I   L                  
Sbjct: 475 ----------DPTGQ----KRIVVFVARKETAHRLRIIMGLL------------------ 502

Query: 588 YIKNKVNIYSIHSKQKLKERLENINKFSQQNHKAILFCTDVLSRGIDLDKCDLIIQLNCP 647
                +++  +H     ++RL+++NKF +     +L CTD+ SRG+D+ K +++I  + P
Sbjct: 503 ----GMSVGELHGSLTQEQRLDSVNKF-KNLEVPVLICTDLASRGLDIPKIEVVINYDMP 557

Query: 648 ISDITFVHRSGRTARNFKKGKCICFITETEIYKWKTSLEKVGI-NIQDLQELDYLKSINE 706
            S   ++HR GRTAR  ++G+ + F+ E+       S+ +  I ++++ + L   K++  
Sbjct: 558 KSYEIYLHRVGRTARAGREGRSVTFVGES---SQDRSIVRAAIKSVEENKSLTQGKALGR 614

Query: 707 E-DYAKI---NKAIECANKMIE 724
             D+ +I   NK +E  N  IE
Sbjct: 615 NVDWVQIEETNKLVESMNDTIE 636

 Score = 16.9 bits (32), Expect = 4.3
 Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 9/74 (12%)

Query: 215 KNEEELEKDNNIKYKIHCNNWNNGGKI----FILHSVMKSLFDNAFFKPTEIQSKTLEKS 270
           K EEE EK+     K+   N ++  ++    F + + M +  +N   +  E + K  E+ 
Sbjct: 129 KQEEETEKE-----KVEKENDSDDEELAMDGFGMGAPMNNGDENQSEEEEEEEEKEEEEE 183

Query: 271 INDKNDIVVISKTG 284
             ++ + + + K G
Sbjct: 184 EEEEQEEMTLEKGG 197

 Score = 16.9 bits (32), Expect = 4.3
 Identities = 7/17 (41%), Positives = 9/17 (52%)

Query: 32  EAEGNNVKILSADNLNS 48
           E EG+  K    +N NS
Sbjct: 219 ETEGDEAKKQMYENFNS 235

 Score = 15.8 bits (29), Expect = 9.5
 Identities = 5/12 (41%), Positives = 9/12 (75%)

Query: 348 STIIGGLNLNKQ 359
           S ++G L+ NK+
Sbjct: 686 SKVLGALSRNKK 697

Lambda     K      H
   0.319    0.136    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1093
Number of extensions: 44
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 796
Length of database: 752
Length adjustment: 41
Effective length of query: 755
Effective length of database: 711
Effective search space:   536805
Effective search space used:   536805
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.2 bits)
S2: 29 (15.8 bits)