>YNL112W DBP2 SGDID:S000005056, Chr XIV from
           413641-414913,415916-416283, Verified ORF, "Essential
           ATP-dependent RNA helicase of the DEAD-box protein
           family, involved in nonsense-mediated mRNA decay and
           rRNA processing"
          Length = 546

 Score =  332 bits (852), Expect = 1e-95
 Identities = 181/321 (56%), Positives = 219/321 (68%), Gaps = 12/321 (3%)

Query: 24  NSYGNYQAYGQQYRANYGTGYVPXXXXXXXXXGKNLAPIDW--KTINLVPFEKNFYKEHE 81
           NSY N +  G  YR  +G               + L   +W  +   L  FEKNFY EHE
Sbjct: 31  NSY-NDRPQGGNYRGGFG-------GRSNYNQPQELIKPNWDEELPKLPTFEKNFYVEHE 82

Query: 82  DISKLSTKEVKEIRDKHKITILEGENVPKPVVSINKIGFPDYVIKSLKNNNIVAPTPIQI 141
            +   S  E+ + R ++++TI  G ++PKP+ + ++ GFPDYV+  +K      PT IQ 
Sbjct: 83  SVRDRSDSEIAQFRKENEMTI-SGHDIPKPITTFDEAGFPDYVLNEVKAEGFDKPTGIQC 141

Query: 142 QGWPIALSGKDMIGKAETGSGKTLAFILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQ 201
           QGWP+ALSG+DM+G A TGSGKTL++ LP  VHI AQP L  GDGPIVLVLAPTRELA Q
Sbjct: 142 QGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQ 201

Query: 202 IRQECIKFSTESKIRNTCAYGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRV 261
           I+ EC KF   S+IRNTC YGGVPKS QI  L +G  I+IA PGRLID+LE   TNL RV
Sbjct: 202 IQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRV 261

Query: 262 TYLVLDEADKMLDMGFELQIRKIVDQIRPDRQTLMWSATWPKEVQALAKDLCKEQPIQVN 321
           TYLVLDEAD+MLDMGFE QIRKIVDQIRPDRQTLMWSATWPKEV+ LA D   + PIQV 
Sbjct: 262 TYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLAADYLND-PIQVQ 320

Query: 322 VGSLTLTACRSIKQEIYLLED 342
           VGSL L+A  +I Q + ++ D
Sbjct: 321 VGSLELSASHNITQIVEVVSD 341

 Score = 18.9 bits (37), Expect = 0.35
 Identities = 9/25 (36%), Positives = 11/25 (44%), Gaps = 2/25 (8%)

Query: 19  YPDYNNSYGNYQAYGQQYRANYGTG 43
           +P Y    G    YG+  R  YG G
Sbjct: 502 HPRYGGGRGGRGGYGR--RGGYGGG 524

Lambda     K      H
   0.318    0.137    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 557
Number of extensions: 20
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 352
Length of database: 546
Length adjustment: 32
Effective length of query: 320
Effective length of database: 514
Effective search space:   164480
Effective search space used:   164480
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.3 bits)
S2: 25 (14.2 bits)