Query= PF14_0437 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) helicase,
truncated, putative
(193 letters)
>FBgn0003261 type=protein;
loc=3R:complement(1826885..1827082,1827280..1827458,
1829395..1829633,1829739..1830848,1830928..1830938);
ID=FBpp0078303; name=Rm62-PF;
parent=FBgn0003261,FBtr0078654;
dbxref=FlyBase:FBpp0078303,
FlyBase_Annotation_IDs:CG10279-PF,GB_protein:AAG22212.1,
GB_protein:AAG22212;
MD5=91fd1a2ab1e8d5284cd393f1f664c60d; release=r5.1;
species=Dmel; length=578;
Length = 578
Score = 156 bits (394), Expect = 8e-43
Identities = 82/173 (47%), Positives = 111/173 (64%), Gaps = 11/173 (6%)
Query: 7 NEHEKIGNLKSLLQRIFKDND---RIIVFVETKKNADFITKALRLDGMPALCIHGDKKQE 63
+E K LK+LL I+ ++ +II+FVETK+ D + + +R G+ IHGDK Q
Sbjct: 367 DEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQS 426
Query: 64 ERRWVLNEFKTGKSPIMIATDVASRGLDIKNVKYVINFDFPNQIEDYVHRIGRTGRAGSH 123
ER +VL EF++GKS I++ATDVA+RGLD+ +KYVINFD+P EDY+HRIGRTGR+ +
Sbjct: 427 ERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFDYPQNSEDYIHRIGRTGRSNTK 486
Query: 124 GASFTFLTADKYRLAKDLVKILRESEQPVPPQLEKISYSMGNNQRRNPYYSSG 176
G SF F T + + AK LV +LRE+ Q + P LE N RN Y G
Sbjct: 487 GTSFAFFTKNNAKQAKALVDVLREANQEINPALE--------NLARNSRYDGG 531
Score = 15.0 bits (27), Expect = 2.8
Identities = 4/7 (57%), Positives = 6/7 (85%)
Query: 104 PNQIEDY 110
PN I+D+
Sbjct: 136 PNPIQDF 142
Score = 14.2 bits (25), Expect = 4.7
Identities = 5/17 (29%), Positives = 9/17 (52%)
Query: 14 NLKSLLQRIFKDNDRII 30
NLK + + DR++
Sbjct: 284 NLKRCTYLVLDEADRML 300
Score = 13.9 bits (24), Expect = 6.1
Identities = 4/9 (44%), Positives = 7/9 (77%)
Query: 58 GDKKQEERR 66
GD+ ++RR
Sbjct: 21 GDRGGDDRR 29
Lambda K H
0.319 0.137 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 338
Number of extensions: 18
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 193
Length of database: 578
Length adjustment: 28
Effective length of query: 165
Effective length of database: 550
Effective search space: 90750
Effective search space used: 90750
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 23 (13.4 bits)
S2: 23 (13.5 bits)