Query= PF14_0448 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein S2, putative
(272 letters)
>FBgn0004867 type=protein; loc=2L:complement(9896327..9897130);
ID=FBpp0079500; name=sop-PA;
parent=FBgn0004867,FBtr0079905;
dbxref=FlyBase:FBpp0079500,
FlyBase_Annotation_IDs:CG5920-PA,GB_protein:AAF52822.1,
GB_protein:AAF52822;
MD5=207bcaed11f5ff09092a8f6cd10003e0; release=r5.1;
species=Dmel; length=267;
Length = 267
Score = 327 bits (838), Expect = 2e-94
Identities = 158/225 (70%), Positives = 187/225 (83%), Gaps = 5/225 (2%)
Query: 35 EDDLKNWVPVTKLGRLVKEGKIVSIEEIYLHSLPIKEYQIIDYFFQPNECSHPLKDDVVK 94
++D K WVPVTKLGRLV+EGKI S+EEIYL+SLPIKE++IID+F + LKD+V+K
Sbjct: 37 KEDSKEWVPVTKLGRLVREGKIKSLEEIYLYSLPIKEFEIIDFFLGSS-----LKDEVLK 91
Query: 95 IMPVQKQTRAGQRTRFKAFVAIGDGNGHCGLGVKCAKEVATAIRGAIISAKLSLIPVRRG 154
IMPVQKQTRAGQRTRFKAFVAIGD NGH GLGVKC+KEVATAIRGAII AKLS++PVRRG
Sbjct: 92 IMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVVPVRRG 151
Query: 155 YWGNKIGDPHTVPMKVSGKCGSVRIRLVPAPRGTQIVGAPTTKKMLNFAGIKDCFSSSCG 214
YWGNKIG PHTVP KV+GKCGSV +RL+PAPRGT IV AP KK+L AGI+DC++S+ G
Sbjct: 152 YWGNKIGKPHTVPCKVTGKCGSVSVRLIPAPRGTGIVSAPVPKKLLTMAGIEDCYTSARG 211
Query: 215 KTKTKGNFLRAIFNALSKTYGYLTPDLWKVTNFDKSPYEEWSDFL 259
T T GNF +A + A++KTY YLTPDLWK +PY+ +SDFL
Sbjct: 212 STGTLGNFAKATYAAIAKTYAYLTPDLWKEMPLGSTPYQAYSDFL 256
Lambda K H
0.319 0.137 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 293
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 267
Length adjustment: 25
Effective length of query: 247
Effective length of database: 242
Effective search space: 59774
Effective search space used: 59774
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.5 bits)
S2: 21 (12.7 bits)