Query= PF14_0563 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) DEAD-box RNA
helicase, putative
(741 letters)
>FBgn0037573 type=protein;
loc=3R:join(4139060..4139192,4139253..4139619,
4139675..4139866,4139928..4140435); ID=FBpp0081324;
name=eIF4AIII-PA; parent=FBgn0037573,FBtr0081834;
dbxref=FlyBase:FBpp0081324,
FlyBase_Annotation_IDs:CG7483-PA,GB_protein:AAF54221.1,
GB_protein:AAF54221;
MD5=4f16f87bb2db6e9762ded7d42dd01615; release=r5.1;
species=Dmel; length=399;
Length = 399
Score = 233 bits (595), Expect = 1e-65
Identities = 141/404 (34%), Positives = 226/404 (55%), Gaps = 43/404 (10%)
Query: 326 TWEELKIDNELIQILTYLKFLGPSKIQAYALPIILSSNKNLIAQSQNGSGKTLTFVIAML 385
T+ + + EL++ + F PS IQ ++ I+ +++IAQ+Q+G+GKT TF I++L
Sbjct: 27 TFNAMNLKEELLRGIYAYGFEKPSAIQQRSITPIVKG-RDVIAQAQSGTGKTATFSISIL 85
Query: 386 CKINRTLSSLQAVCICPTRELSQQNYDVVCNFTKYLNVKVFLAVP---LCERYNKSG-GY 441
++ TL Q +C+ PTREL+ Q V+ +NV+ + + L E K G
Sbjct: 86 QSLDTTLRETQVLCLSPTRELAVQIQKVILALGDMMNVQCHVCIGGTNLGEDIRKLDYGQ 145
Query: 442 QIYVGTPGKTLDFLKRKFIDTKNIKLFVLDEADDLIDIKNNMSSQVETIKRFLPRSCQIL 501
I GTPG+ D +KR+ + T+ IK+ VLDEAD++++ Q+ + R+LP + Q++
Sbjct: 146 HIVSGTPGRVFDMIKRRVLRTRAIKMLVLDEADEMLN--KGFKEQIYDVYRYLPPATQVV 203
Query: 502 LFSATYNDSVRKFADQFAPKATKISVRQEDLTLKCVKQYYLITENDEQKYYYLSELYCSM 561
L SAT + + +F +I V++++LTL+ +KQ+++ E +E K+ L +LY ++
Sbjct: 204 LISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 263
Query: 562 TISQCVIFVNSKKSAYNLYNFMTENSHNVTLICADSIISRFTKNQIQKANVLGMDPKTRD 621
TI+Q VIF N+K+ L M E + V+ + D M K RD
Sbjct: 264 TITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGD------------------MPQKERD 305
Query: 622 TLMADFKKGISKVLICTDLLSRGIDVPSISLVINFDLPYIYQGRIGDTLNNTSNQRVNME 681
+M +F+ G S+VLI TD+ +RGIDV +SLVIN+DLP N E
Sbjct: 306 EIMKEFRAGQSRVLITTDVWARGIDVQQVSLVINYDLPN------------------NRE 347
Query: 682 TYIHRIGRTGRFGTKGMAINFISKNQMSHIKQIEEYYKCSIADL 725
YIHRIGR+GRFG KG+AINF+ + + ++ IE+YY I ++
Sbjct: 348 LYIHRIGRSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEM 391
Lambda K H
0.314 0.131 0.366
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 503
Number of extensions: 18
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 741
Length of database: 399
Length adjustment: 35
Effective length of query: 706
Effective length of database: 364
Effective search space: 256984
Effective search space used: 256984
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.2 bits)
S2: 27 (15.0 bits)