Query= PF14_0576 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ubiquitin
carboxyl-terminal hydrolase, putative
(208 letters)
>FBgn0010288 type=protein;
loc=2L:complement(2212970..2213333,2213415..2213557,
2213616..2213756,2213896..2213931); ID=FBpp0077516;
name=Uch-PA; parent=FBgn0010288,FBtr0077844;
dbxref=FlyBase:FBpp0077516,
FlyBase_Annotation_IDs:CG4265-PA,GB_protein:AAF51291.1,
GB_protein:AAF51291;
MD5=f5595848dadffe50a0f46fa0f534a28d; release=r5.1;
species=Dmel; length=227;
Length = 227
Score = 79.3 bits (194), Expect = 5e-20
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 36/224 (16%)
Query: 7 WTPLESNPDSLYLYSCKLGQSKLKFV-DIYGFNNDLLDMIPQPVQAVIFLYPVNDNIV-- 63
WTPLESNP+ L Y KLG S V D+ G +D L+ IP+PV+A I L+P ++
Sbjct: 4 WTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEKH 63
Query: 64 -SENNTNDKHNLKENFDNVWFIKQVKIITLCNMNNILPILYVCFNSIELKNNKSI----- 117
+E + K +++ +++++++Q N + +++ N+ E+ ++ +
Sbjct: 64 RAEEHDRIKEVEEQHPEDLFYMRQF----THNACGTVALIHSVANNKEVDIDRGVLKDFL 119
Query: 118 ---ENLHHEFCGQVENRDDILDVD-------------------THFIVFVQIEGKIIELD 155
+L E G+ +D+ D HFI V EG + ELD
Sbjct: 120 EKTASLSPEERGRALEKDEKFTADHEALAQEGQTNAANHEKVIHHFIALVNKEGTLYELD 179
Query: 156 GRKDHPTVHCFTNGDNFLYDTGKIIQDKFIEKCKDDLRFSALAV 199
GRK P H T+ + F+ D K+ ++ F+ + +++RF+ LA+
Sbjct: 180 GRKSFPIKHGPTSEETFVKDAAKVCKE-FMARDPNEVRFTVLAL 222
Lambda K H
0.323 0.142 0.436
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 129
Number of extensions: 6
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 208
Length of database: 227
Length adjustment: 22
Effective length of query: 186
Effective length of database: 205
Effective search space: 38130
Effective search space used: 38130
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)