Query= PF14_0579 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein L27, putative
(121 letters)
>YDR471W RPL27B SGDID:S000002879, Chr IV from
1401761-1401791,1402176-1402555, Verified ORF, "Protein
component of the large (60S) ribosomal subunit, nearly
identical to Rpl27Ap and has similarity to rat L27
ribosomal protein"
Length = 136
Score = 77.4 bits (189), Expect = 6e-20
Identities = 37/85 (43%), Positives = 50/85 (58%)
Query: 1 MGKLLKPGKVIIILNGRRAGKKAVIVNTYEGQTRERPYSYCLVAGIEKHPLKVNXXXXXX 60
M K LK GKV +++ GR AGKK VIV ++ ++ P+ + LVAGIE++P KV
Sbjct: 1 MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAK 60
Query: 61 XXXXXXXXXAFIKCINVNHILPTRY 85
FIK +N NH+LPTRY
Sbjct: 61 KVAKRTKIKPFIKVVNYNHLLPTRY 85
Lambda K H
0.323 0.142 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 121
Length of database: 136
Length adjustment: 14
Effective length of query: 107
Effective length of database: 122
Effective search space: 13054
Effective search space used: 13054
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.8 bits)
S2: 15 (10.4 bits)