Query= PF14_0584 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal protein S4, putative (159 letters)
>FBgn0034232 type=protein;
           loc=2R:join(13405796..13405932,13405989..13406200,
           13406258..13406454); ID=FBpp0086096; name=CG4866-PA;
           parent=FBgn0034232,FBtr0086940;
           dbxref=FlyBase:FBpp0086096,
           FlyBase_Annotation_IDs:CG4866-PA,GB_protein:AAF57847.2,
           GB_protein:AAF57847;
           MD5=a63068c1d552341a00853ebd72505dff; release=r5.1;
           species=Dmel; length=181;
          Length = 181

 Score =  130 bits (327), Expect = 1e-35
 Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 24/180 (13%)

Query: 1   MRKLKYHEQKLLKKVNFYDWKRTNNVREVKVLRKYVIQNREDYTKYNKICGYITKLVSKL 60
           +RKLK+HEQKLLKKV+F  WK  N  +E K+LR++ IQ REDYTKYNK+   I +L  ++
Sbjct: 2   VRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAERI 61

Query: 61  RLLPENDEF------------------------PECEKITVSSFCRRRLAVLLFRLKFVQ 96
             L  ++ F                            KI+ S FCRRRL V++ +L+  +
Sbjct: 62  AKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSE 121

Query: 97  TIKLAITYIQHXXXXXXXXXXXXPSFHINRNMEDHIKWADGSKILKHIQKHRESKDDYEL 156
            +K A   I+H            P+F ++RN+ED + W DGSKI +H+ ++ + +DD+++
Sbjct: 122 HLKAATDLIEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYNDMRDDFQM 181
Lambda     K      H
   0.323    0.138    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 125
Number of extensions: 6
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 181
Length adjustment: 18
Effective length of query: 141
Effective length of database: 163
Effective search space:    22983
Effective search space used:    22983
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.3 bits)
S2: 18 (11.5 bits)