Query= PF14_0584 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein S4, putative
(159 letters)
>FBgn0034232 type=protein;
loc=2R:join(13405796..13405932,13405989..13406200,
13406258..13406454); ID=FBpp0086096; name=CG4866-PA;
parent=FBgn0034232,FBtr0086940;
dbxref=FlyBase:FBpp0086096,
FlyBase_Annotation_IDs:CG4866-PA,GB_protein:AAF57847.2,
GB_protein:AAF57847;
MD5=a63068c1d552341a00853ebd72505dff; release=r5.1;
species=Dmel; length=181;
Length = 181
Score = 130 bits (327), Expect = 1e-35
Identities = 66/180 (36%), Positives = 101/180 (56%), Gaps = 24/180 (13%)
Query: 1 MRKLKYHEQKLLKKVNFYDWKRTNNVREVKVLRKYVIQNREDYTKYNKICGYITKLVSKL 60
+RKLK+HEQKLLKKV+F WK N +E K+LR++ IQ REDYTKYNK+ I +L ++
Sbjct: 2 VRKLKFHEQKLLKKVDFITWKVDNGGKENKILRRFHIQKREDYTKYNKLSREIRELAERI 61
Query: 61 RLLPENDEF------------------------PECEKITVSSFCRRRLAVLLFRLKFVQ 96
L ++ F KI+ S FCRRRL V++ +L+ +
Sbjct: 62 AKLDASEPFKTEATTMLLNKLHAMGVSNDQLTLETAAKISASHFCRRRLPVIMVKLRMSE 121
Query: 97 TIKLAITYIQHXXXXXXXXXXXXPSFHINRNMEDHIKWADGSKILKHIQKHRESKDDYEL 156
+K A I+H P+F ++RN+ED + W DGSKI +H+ ++ + +DD+++
Sbjct: 122 HLKAATDLIEHGHVRVGPEMIKDPAFLVSRNLEDFVTWVDGSKIKEHVLRYNDMRDDFQM 181
Lambda K H
0.323 0.138 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 125
Number of extensions: 6
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 181
Length adjustment: 18
Effective length of query: 141
Effective length of database: 163
Effective search space: 22983
Effective search space used: 22983
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.3 bits)
S2: 18 (11.5 bits)