Query= PF14_0589 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) valine - tRNA ligase, putative (1090 letters)
>YGR094W VAS1 SGDID:S000003326, Chr VII from 672190-675504, Verified
           ORF, "Mitochondrial and cytoplasmic valyl-tRNA
           synthetase"
          Length = 1104

 Score =  752 bits (1941), Expect = 0.0
 Identities = 407/921 (44%), Positives = 555/921 (60%), Gaps = 93/921 (10%)

Query: 44  AYDPKEVESKWYSFWEENDYFXXXXXXXXXXXXXXXXXXFVIILPPPNVTGTLHIGHTLT 103
           AY+P  VES WY +W +   F                  F I  PPPNVTG LHIGH LT
Sbjct: 147 AYNPANVESSWYDWWIKTGVFEPEFTADGKVKPEGV---FCIPAPPPNVTGALHIGHALT 203

Query: 104 VAIQDSLVRYKRMKNYLTLYIPGTDHAGIATQTVVEKMLYKKENKIRQDYGREEFVKKIY 163
           +AIQDSL+RY RMK    L++PG DHAGIATQ+VVEK ++ K+ K R DYGRE FV K++
Sbjct: 204 IAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQIWAKDRKTRHDYGREAFVGKVW 263

Query: 164 EWKDLHGNKINNQMKRIGASVDWSREYFTMNENLSNAVKEAFIKFYESGLIYRDNRLVAW 223
           EWK+ + ++I NQ++++GAS DWSRE FT++  L+ +V+EAF++ ++ G+IYR +RLV W
Sbjct: 264 EWKEEYHSRIKNQIQKLGASYDWSREAFTLSPELTKSVEEAFVRLHDEGVIYRASRLVNW 323

Query: 224 CPHLKTALSDIEVNLEEXXXXXXXXXXSFDHLVEVGVLYKFFYQIKDSEEKIEIATTRIE 283
              L TA+S++EV  ++           +D  VE GVL  F Y +  S+EK+ IATTR E
Sbjct: 324 SVKLNTAISNLEVENKDVKSRTLLSVPGYDEKVEFGVLTSFAYPVIGSDEKLIIATTRPE 383

Query: 284 TMLGDVAVAVHPKDKRYAHLIGKEIVHPFIPNRKIIIIAD-DFVDMQYGTGAVKITPAHD 342
           T+ GD AVAVHP D RY HL GK I HPF+P RKI II D + VDM++GTGAVKITPAHD
Sbjct: 384 TIFGDTAVAVHPDDDRYKHLHGKFIQHPFLP-RKIPIITDKEAVDMEFGTGAVKITPAHD 442

Query: 343 KNDYDMMKRHNLNYINIFTLDGHINENGGKLFQGQHRFECRFKIQEELKKLNLLSDKVPN 402
           +NDY+  KRHNL +INI T DG +NE  G  +QG  RF+ R K+ E+LK+ NL   +  N
Sbjct: 443 QNDYNTGKRHNLEFINILTDDGLLNEECGPEWQGMKRFDARKKVIEQLKEKNLYVGQEDN 502

Query: 403 PMSLPLCSRTNDIIEYMLIPQWYMNCSELAHQAIQNVKLKELEIIPPQHVNTWYYWLENV 462
            M++P CSR+ DIIE +L PQW+++ SE+A  AI+ V+  ++ I P      +++WL N+
Sbjct: 503 EMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVRDGQITITPKSSEAEYFHWLGNI 562

Query: 463 RDWCISRQLWWGHRIPAYKIVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEQNELW 522
           +DWCISRQLWWGHR P Y I  +                                  + W
Sbjct: 563 QDWCISRQLWWGHRCPVYFINIEGEEHDRI-------------------------DGDYW 597

Query: 523 VVGRSYEEGLEKAKSLVGDNKPFELIQDEDVLDTWFSSSLVPFSSLGWPNQTEDLETFFP 582
           V GRS EE  +KA +   ++K F L QDEDVLDTWFSS L PFS+LGWP +T+D+ETF+P
Sbjct: 598 VAGRSMEEAEKKAAAKYPNSK-FTLEQDEDVLDTWFSSGLWPFSTLGWPEKTKDMETFYP 656

Query: 583 NTILETGQDILFFWVARMVMVSLHLMKKLPFKTIYLHAMIRDSRGEKMSKSKGNVVDPLD 642
            ++LETG DILFFWV RM+++ L L   +PFK ++ H+++RD++G KMSKS GNV+DPLD
Sbjct: 657 FSMLETGWDILFFWVTRMILLGLKLTGSVPFKEVFCHSLVRDAQGRKMSKSLGNVIDPLD 716

Query: 643 IIDGISLNKLHEKLYEGNLPEKEIKRAIELQKKEFPKGIPECGTDALRFGLLTYLKQGRN 702
           +I GI L+ LH KL +GNL  +E+++A   QK+ +P GIP+CGTDA+RF L  Y   GR+
Sbjct: 717 VITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRD 776

Query: 703 VNLDINRIIGYRHFCNKLWNAVKFFLKTLPDNYDNYNILIDKPEYVEKLQWE----DKWI 758
           +NLDI R+ GYR FCNK++ A KF L  L D+Y        +P   E L       +KWI
Sbjct: 777 INLDILRVEGYRKFCNKIYQATKFALMRLGDDY--------QPPATEGLSGNESLVEKWI 828

Query: 759 LHKLNVYIKNANDNFESYNFSEVAFASYNFWLYDLCDIYLELIKPRLNTDSHDNFVSGLK 818
           LHKL    K  N+  +  +F     + Y FW Y +CD+Y+E  K  +   S         
Sbjct: 829 LHKLTETSKIVNEALDKRDFLTSTSSIYEFW-YLICDVYIENSKYLIQEGS--------- 878

Query: 819 EKSDMNNIEKREVVEQNDNNIESVNTNHINEINKCDNYLDGYGANKTLHVCLDYGLRLLH 878
                  IEK+                                A  TL++ LD  L+L+H
Sbjct: 879 ------AIEKK-------------------------------SAKDTLYILLDNALKLIH 901

Query: 879 PISPFITEELYQKI-SSEPYKFNSISLANYPEYINIWHNENINSEMNKFMNIVKQFRSFI 937
           P  PFI+EE++Q++      K  SI  A+YP Y++ + +    +  +  +NI K+ RS +
Sbjct: 902 PFMPFISEEMWQRLPKRSTEKAASIVKASYPVYVSEYDDVKSANAYDLVLNITKEARSLL 961

Query: 938 STLEIPPKTKLNCFIAAKHEE 958
           S   I    K+  F+ + HEE
Sbjct: 962 SEYNILKNGKV--FVESNHEE 980

 Score = 21.6 bits (44), Expect = 0.36
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 6/46 (13%)

Query: 745 PEYVEKLQWEDKWILHKLNVYIKNANDNFESYNFSEVAFASYNFWL 790
           PE+++K    +K IL  L+      +   ++YN + V  + Y++W+
Sbjct: 123 PEFIDKTVPGEKKILVSLD------DPALKAYNPANVESSWYDWWI 162

 Score = 20.0 bits (40), Expect = 1.0
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 13/45 (28%)

Query: 405 SLPLCSRTNDIIEYMLIPQWYMNCSELAHQAIQNVKLKELEIIPP 449
           SLPLC             Q +     L H  ++  K+ +L+ +PP
Sbjct: 24  SLPLC-------------QNFSLKKSLTHNQVRFFKMSDLDNLPP 55

 Score = 16.9 bits (32), Expect = 8.8
 Identities = 7/19 (36%), Positives = 11/19 (57%)

Query: 1048 PNYEQKVPEQVRTMYSEKV 1066
            P Y++KV   V T ++  V
Sbjct: 350  PGYDEKVEFGVLTSFAYPV 368

 Score = 16.9 bits (32), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)

Query: 39  KTMKDAYDPKEVE 51
           K ++   DP+EVE
Sbjct: 729 KLLQGNLDPREVE 741
Lambda     K      H
   0.319    0.137    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2887
Number of extensions: 144
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 11
Length of query: 1090
Length of database: 1104
Length adjustment: 46
Effective length of query: 1044
Effective length of database: 1058
Effective search space:  1104552
Effective search space used:  1104552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.6 bits)
S2: 32 (16.9 bits)