Query= PF14_0589 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) valine - tRNA
ligase, putative
(1090 letters)
>YGR094W VAS1 SGDID:S000003326, Chr VII from 672190-675504, Verified
ORF, "Mitochondrial and cytoplasmic valyl-tRNA
synthetase"
Length = 1104
Score = 752 bits (1941), Expect = 0.0
Identities = 407/921 (44%), Positives = 555/921 (60%), Gaps = 93/921 (10%)
Query: 44 AYDPKEVESKWYSFWEENDYFXXXXXXXXXXXXXXXXXXFVIILPPPNVTGTLHIGHTLT 103
AY+P VES WY +W + F F I PPPNVTG LHIGH LT
Sbjct: 147 AYNPANVESSWYDWWIKTGVFEPEFTADGKVKPEGV---FCIPAPPPNVTGALHIGHALT 203
Query: 104 VAIQDSLVRYKRMKNYLTLYIPGTDHAGIATQTVVEKMLYKKENKIRQDYGREEFVKKIY 163
+AIQDSL+RY RMK L++PG DHAGIATQ+VVEK ++ K+ K R DYGRE FV K++
Sbjct: 204 IAIQDSLIRYNRMKGKTVLFLPGFDHAGIATQSVVEKQIWAKDRKTRHDYGREAFVGKVW 263
Query: 164 EWKDLHGNKINNQMKRIGASVDWSREYFTMNENLSNAVKEAFIKFYESGLIYRDNRLVAW 223
EWK+ + ++I NQ++++GAS DWSRE FT++ L+ +V+EAF++ ++ G+IYR +RLV W
Sbjct: 264 EWKEEYHSRIKNQIQKLGASYDWSREAFTLSPELTKSVEEAFVRLHDEGVIYRASRLVNW 323
Query: 224 CPHLKTALSDIEVNLEEXXXXXXXXXXSFDHLVEVGVLYKFFYQIKDSEEKIEIATTRIE 283
L TA+S++EV ++ +D VE GVL F Y + S+EK+ IATTR E
Sbjct: 324 SVKLNTAISNLEVENKDVKSRTLLSVPGYDEKVEFGVLTSFAYPVIGSDEKLIIATTRPE 383
Query: 284 TMLGDVAVAVHPKDKRYAHLIGKEIVHPFIPNRKIIIIAD-DFVDMQYGTGAVKITPAHD 342
T+ GD AVAVHP D RY HL GK I HPF+P RKI II D + VDM++GTGAVKITPAHD
Sbjct: 384 TIFGDTAVAVHPDDDRYKHLHGKFIQHPFLP-RKIPIITDKEAVDMEFGTGAVKITPAHD 442
Query: 343 KNDYDMMKRHNLNYINIFTLDGHINENGGKLFQGQHRFECRFKIQEELKKLNLLSDKVPN 402
+NDY+ KRHNL +INI T DG +NE G +QG RF+ R K+ E+LK+ NL + N
Sbjct: 443 QNDYNTGKRHNLEFINILTDDGLLNEECGPEWQGMKRFDARKKVIEQLKEKNLYVGQEDN 502
Query: 403 PMSLPLCSRTNDIIEYMLIPQWYMNCSELAHQAIQNVKLKELEIIPPQHVNTWYYWLENV 462
M++P CSR+ DIIE +L PQW+++ SE+A AI+ V+ ++ I P +++WL N+
Sbjct: 503 EMTIPTCSRSGDIIEPLLKPQWWVSQSEMAKDAIKVVRDGQITITPKSSEAEYFHWLGNI 562
Query: 463 RDWCISRQLWWGHRIPAYKIVFKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEQNELW 522
+DWCISRQLWWGHR P Y I + + W
Sbjct: 563 QDWCISRQLWWGHRCPVYFINIEGEEHDRI-------------------------DGDYW 597
Query: 523 VVGRSYEEGLEKAKSLVGDNKPFELIQDEDVLDTWFSSSLVPFSSLGWPNQTEDLETFFP 582
V GRS EE +KA + ++K F L QDEDVLDTWFSS L PFS+LGWP +T+D+ETF+P
Sbjct: 598 VAGRSMEEAEKKAAAKYPNSK-FTLEQDEDVLDTWFSSGLWPFSTLGWPEKTKDMETFYP 656
Query: 583 NTILETGQDILFFWVARMVMVSLHLMKKLPFKTIYLHAMIRDSRGEKMSKSKGNVVDPLD 642
++LETG DILFFWV RM+++ L L +PFK ++ H+++RD++G KMSKS GNV+DPLD
Sbjct: 657 FSMLETGWDILFFWVTRMILLGLKLTGSVPFKEVFCHSLVRDAQGRKMSKSLGNVIDPLD 716
Query: 643 IIDGISLNKLHEKLYEGNLPEKEIKRAIELQKKEFPKGIPECGTDALRFGLLTYLKQGRN 702
+I GI L+ LH KL +GNL +E+++A QK+ +P GIP+CGTDA+RF L Y GR+
Sbjct: 717 VITGIKLDDLHAKLLQGNLDPREVEKAKIGQKESYPNGIPQCGTDAMRFALCAYTTGGRD 776
Query: 703 VNLDINRIIGYRHFCNKLWNAVKFFLKTLPDNYDNYNILIDKPEYVEKLQWE----DKWI 758
+NLDI R+ GYR FCNK++ A KF L L D+Y +P E L +KWI
Sbjct: 777 INLDILRVEGYRKFCNKIYQATKFALMRLGDDY--------QPPATEGLSGNESLVEKWI 828
Query: 759 LHKLNVYIKNANDNFESYNFSEVAFASYNFWLYDLCDIYLELIKPRLNTDSHDNFVSGLK 818
LHKL K N+ + +F + Y FW Y +CD+Y+E K + S
Sbjct: 829 LHKLTETSKIVNEALDKRDFLTSTSSIYEFW-YLICDVYIENSKYLIQEGS--------- 878
Query: 819 EKSDMNNIEKREVVEQNDNNIESVNTNHINEINKCDNYLDGYGANKTLHVCLDYGLRLLH 878
IEK+ A TL++ LD L+L+H
Sbjct: 879 ------AIEKK-------------------------------SAKDTLYILLDNALKLIH 901
Query: 879 PISPFITEELYQKI-SSEPYKFNSISLANYPEYINIWHNENINSEMNKFMNIVKQFRSFI 937
P PFI+EE++Q++ K SI A+YP Y++ + + + + +NI K+ RS +
Sbjct: 902 PFMPFISEEMWQRLPKRSTEKAASIVKASYPVYVSEYDDVKSANAYDLVLNITKEARSLL 961
Query: 938 STLEIPPKTKLNCFIAAKHEE 958
S I K+ F+ + HEE
Sbjct: 962 SEYNILKNGKV--FVESNHEE 980
Score = 21.6 bits (44), Expect = 0.36
Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 6/46 (13%)
Query: 745 PEYVEKLQWEDKWILHKLNVYIKNANDNFESYNFSEVAFASYNFWL 790
PE+++K +K IL L+ + ++YN + V + Y++W+
Sbjct: 123 PEFIDKTVPGEKKILVSLD------DPALKAYNPANVESSWYDWWI 162
Score = 20.0 bits (40), Expect = 1.0
Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 13/45 (28%)
Query: 405 SLPLCSRTNDIIEYMLIPQWYMNCSELAHQAIQNVKLKELEIIPP 449
SLPLC Q + L H ++ K+ +L+ +PP
Sbjct: 24 SLPLC-------------QNFSLKKSLTHNQVRFFKMSDLDNLPP 55
Score = 16.9 bits (32), Expect = 8.8
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 1048 PNYEQKVPEQVRTMYSEKV 1066
P Y++KV V T ++ V
Sbjct: 350 PGYDEKVEFGVLTSFAYPV 368
Score = 16.9 bits (32), Expect = 8.8
Identities = 6/13 (46%), Positives = 9/13 (69%)
Query: 39 KTMKDAYDPKEVE 51
K ++ DP+EVE
Sbjct: 729 KLLQGNLDPREVE 741
Lambda K H
0.319 0.137 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2887
Number of extensions: 144
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 11
Length of query: 1090
Length of database: 1104
Length adjustment: 46
Effective length of query: 1044
Effective length of database: 1058
Effective search space: 1104552
Effective search space used: 1104552
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 32 (17.6 bits)
S2: 32 (16.9 bits)