Query= PF14_0620 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(858 letters)
>YKR079C TRZ1 SGDID:S000001787, Chr XI from 588947-586431, reverse
complement, Uncharacterized ORF, "tRNase Z, involved in
RNA processing, has two putative nucleotide
triphosphate-binding motifs (P-loop) and a conserved
histidine motif, homolog of the human candidate prostate
cancer susceptibility gene ELAC2"
Length = 838
Score = 103 bits (258), Expect = 3e-26
Identities = 99/364 (27%), Positives = 161/364 (44%), Gaps = 79/364 (21%)
Query: 556 HFQKFNETQFNKMLSYPCFYFLGTGCSMPSTFRNVSGIILSIQK--------NFSIILDF 607
H FN + K + LGTG ++PS +RNV ++ + N +I+LD
Sbjct: 452 HVDNFNNSAEKK--KHVEIITLGTGSALPSKYRNVVSTLVKVPFTDADGNTINRNIMLDA 509
Query: 608 GEGSLYQLYWMSTSWINXXXXXXXXXXXXXXHAHADHHVGLYYLLYMRKYLFPSXXXXXX 667
GE +L ++ M S + H HADHH+G+ +L Y +
Sbjct: 510 GENTLGTIHRMF-SQLAVKSIFQDLKMIYLSHLHADHHLGIISVLN-EWYKYNKDDETSY 567
Query: 668 XXXXT-------LKKWINL-----------------FNELFFDKKLKFVYLTE------- 696
T + +W+ L N+ F + + V L E
Sbjct: 568 IYVVTPWQYHKFVNEWLVLENKEILKRIKYISCEHFINDSFVRMQTQSVPLAEFNEILKE 627
Query: 697 --NLEINQQIDDENDI--------------LNIHVF---KVNHINESYGIKV-----ENK 732
N E N++++ + D L+I F + H + +Y + EN
Sbjct: 628 NSNQESNRKLELDRDSSYRDVDLIRQMYEDLSIEYFQTCRAIHCDWAYSNSITFRMDENN 687
Query: 733 KIGS--IVYSADTRPCENVKKFSK----NCDILIHEATFDDELLGEAINKKHSTTKEAMD 786
+ + + YS DTRP N++KFS N D+LIHEAT +++LL +A+ KKH T EA+
Sbjct: 688 EHNTFKVSYSGDTRP--NIEKFSLEIGYNSDLLIHEATLENQLLEDAVKKKHCTINEAIG 745
Query: 787 ISLEVQCKTLILTHFSQRYPKVPKINMECSSEMQEILNKTIYSFDYMNIPLNLINELPRY 846
+S ++ + LILTHFSQRYPK+P+++ + + + + ++FD M + I E R
Sbjct: 746 VSNKMNARKLILTHFSQRYPKLPQLD----NNIDVMAREFCFAFDSMIVDYEKIGEQQRI 801
Query: 847 FTIL 850
F +L
Sbjct: 802 FPLL 805
Score = 49.3 bits (116), Expect = 9e-10
Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 258 YLIECPQTPGKFYPEKAKKLNIPSGKYYGILKSGKSITINNR-TIHPEEVCDKNIDGRKA 316
Y I GKF E+A KL +P G + L G++IT++N + PE+V + K
Sbjct: 196 YEISFSPVRGKFKVEEAIKLGVPKGPLFAKLTKGQTITLDNGIVVTPEQVLENERHFAKV 255
Query: 317 LIIDLENENDINDLINHLKNKETLYLKNLEYIFHLSNENIINNKIY 362
LI+D+ ++ +N + K+ + L + Y L +E IN+ ++
Sbjct: 256 LILDIPDDLYLNAFVEKFKDYDCAELGMVYYF--LGDEVTINDNLF 299
Score = 28.5 bits (62), Expect = 0.002
Identities = 11/24 (45%), Positives = 18/24 (75%)
Query: 33 GENVQRFLNEHKLHLARIKNIFFT 56
GE QR L E+K+ ++++K+IF T
Sbjct: 35 GEGSQRSLTENKIRISKLKDIFLT 58
Score = 18.1 bits (35), Expect = 2.3
Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 12/45 (26%)
Query: 291 GKSITINNRTIHPEEVCDKNIDGRKALIIDLENENDINDLINHLK 335
G +TIN+ ++ +KN N +N +I+H K
Sbjct: 289 GDEVTINDNLFAFIDIFEKN------------NYGKVNHMISHNK 321
Score = 17.7 bits (34), Expect = 3.0
Identities = 6/14 (42%), Positives = 9/14 (64%)
Query: 421 YEISINEHNENDKE 434
+ I +N+H DKE
Sbjct: 107 FGIDLNDHIMKDKE 120
Score = 17.3 bits (33), Expect = 4.0
Identities = 5/11 (45%), Positives = 9/11 (81%)
Query: 440 NNFNNNGDMQK 450
+NFNN+ + +K
Sbjct: 454 DNFNNSAEKKK 464
Score = 16.2 bits (30), Expect = 8.8
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 557 FQKFNETQFNKMLSY 571
F+K N + N M+S+
Sbjct: 305 FEKNNYGKVNHMISH 319
Score = 16.2 bits (30), Expect = 8.8
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 340 LYLKNLEYIFHLSNENIIN 358
+YL +L HL +++N
Sbjct: 536 IYLSHLHADHHLGIISVLN 554
Score = 16.2 bits (30), Expect = 8.8
Identities = 5/13 (38%), Positives = 10/13 (76%)
Query: 546 ILKENEELLKHFQ 558
++ EN+E+LK +
Sbjct: 584 LVLENKEILKRIK 596
Score = 16.2 bits (30), Expect = 8.8
Identities = 7/34 (20%), Positives = 15/34 (44%)
Query: 526 LSETISDLYPDIFNTSKISNILKENEELLKHFQK 559
L + + + I +SN + + +L HF +
Sbjct: 729 LEDAVKKKHCTINEAIGVSNKMNARKLILTHFSQ 762
Lambda K H
0.320 0.138 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1690
Number of extensions: 93
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 11
Length of query: 858
Length of database: 838
Length adjustment: 42
Effective length of query: 816
Effective length of database: 796
Effective search space: 649536
Effective search space used: 649536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 30 (16.7 bits)
S2: 30 (16.2 bits)