Query= PF14_0627 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) ribosomal
protein S3, putative
(221 letters)
>FBgn0002622 type=protein;
loc=3R:join(19184577..19184612,19184876..19185580);
ID=FBpp0083802; name=RpS3-PA;
parent=FBgn0002622,FBtr0084410;
dbxref=FlyBase:FBpp0083802,
FlyBase_Annotation_IDs:CG6779-PA,GB_protein:AAF56129.1,
GB_protein:AAF56129;
MD5=afce2f20264890e9f016128a095a23e6; release=r5.1;
species=Dmel; length=246;
Length = 246
Score = 298 bits (764), Expect = 5e-86
Identities = 152/216 (70%), Positives = 180/216 (83%), Gaps = 1/216 (0%)
Query: 4 PISKKRKFINDGVFQAELNEFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKG 63
PISKKRKF++DG+F+AELNEFL R LAEDGYSGVEVRVTP RTE+II AT+T++VLG+KG
Sbjct: 6 PISKKRKFVSDGIFKAELNEFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKG 65
Query: 64 RRIRELTSLVQKRFFNKSTNSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGV 123
RRIRELT++VQKRF N T +EL+AE+V RGLCA+AQAESLRYKL GLAVRRACYGV
Sbjct: 66 RRIRELTAMVQKRF-NFETGRIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGV 124
Query: 124 LRHIMESGAKGCEVIVSGKLRAQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVL 183
LR+IMESGAKGCEV+VSGKLR QRAKSMKF DG +I +G+P +V TATR L+QGVL
Sbjct: 125 LRYIMESGAKGCEVVVSGKLRGQRAKSMKFVDGLMIHSGDPCNDYVETATRHVLLRQGVL 184
Query: 184 GIKVKIMLPTAIDTRTGLTSILPDNISVLEPKTDTV 219
GIKVK+MLP + G LPDN+SV+EPK + +
Sbjct: 185 GIKVKVMLPYDPKNKIGPKKPLPDNVSVVEPKEEKI 220
Lambda K H
0.321 0.135 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 206
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 246
Length adjustment: 23
Effective length of query: 198
Effective length of database: 223
Effective search space: 44154
Effective search space used: 44154
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 20 (12.1 bits)
S2: 20 (12.3 bits)