>YNR038W DBP6 SGDID:S000005321, Chr XIV from 695597-697486, Verified
           ORF, "Essential protein involved in ribosome biogenesis;
           putative ATP-dependent RNA helicase of the DEAD-box
           protein family"
          Length = 629

 Score = 34.7 bits (78), Expect = 2e-05
 Identities = 47/181 (25%), Positives = 64/181 (35%), Gaps = 34/181 (18%)

Query: 638 NEKQLYHKYKYSVKIIKSVDLLLKTKSFTINYTNFKSSNSDLLYKIIYQLFNIMVHMDFE 697
           N   LY    +  +  K   L  K   F IN    KS    L+  ++Y +   M H    
Sbjct: 391 NGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLI--LLYSICQFMAHSPIA 448

Query: 698 VGIFILQFIN-SIFSKYPLIRCICEEEGIVVSFMDEDLSVFFHNILLHSSFFKELSCEAL 756
             I I    N S      L++ ICE                       SS  K L   A+
Sbjct: 449 AKILIFVKSNESSIRLSKLLQLICESRS-------------------QSSVLKNLQNLAV 489

Query: 757 NISM---NNSNEEYKKIVEKFIKEQEDNE----IEHKIIKFSLDVNDEDILNQARFMSYD 809
           +I+    NNS  E KKIV  F    E       I   I+   +D+ND       + ++YD
Sbjct: 490 SINSVNSNNSKAENKKIVANFSHHSESAGITILITTDIMSRGIDIND-----ITQVINYD 544

Query: 810 P 810
           P
Sbjct: 545 P 545

 Score = 21.9 bits (45), Expect = 0.13
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)

Query: 625 SDDIERRLTKGIENEKQLYHKYKYSVKIIKSVDLLLKTKSFTINYTNFKSSNSDLLYKII 684
           SD  E +  +GIE+E    H+    +K I   + +    +   N   FKS+      KI 
Sbjct: 110 SDIAESKEDEGIEDEAASTHQ----LKQIPQPEFVKNPMNLNTNSLQFKSTGWLNTEKIY 165

Query: 685 YQLFNIMVHMDF--EVGIFILQFINSIFS 711
           Y    I    D+  E+   +LQ I   FS
Sbjct: 166 YDNSLIKPFSDYANELEAKLLQNICKNFS 194

 Score = 20.0 bits (40), Expect = 0.48
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 657 DLLLKTKSFTINYTNFKSSNSDLLYKIIYQLFNIMVHMDFE 697
           D+L+ T    +++ N KS N   L  +I    + +++  F+
Sbjct: 312 DILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQ 352

 Score = 19.2 bits (38), Expect = 0.82
 Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 37/192 (19%)

Query: 267 HTNNKPGNPTKNFSKLIENVNKVEKLIVKFFRRFCRLLKENISTNPI----------VFV 316
           H N K  N  KN   LI  +++ ++L+ + F+ +C  L  ++ T+ +          +F 
Sbjct: 324 HLNMKSIN-LKNLKFLI--IDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIFS 380

Query: 317 NLLC----ELVGVNLY-----LSREENLLQY---------------LIIYGNLAVYSNKK 352
             L     +L G+NLY     L + + L Q                 +    + +YS  +
Sbjct: 381 ATLTTNTEKLNGLNLYKPKLFLKQTDKLYQLPNKLNEFNINIPTAKSVYKPLILLYSICQ 440

Query: 353 YNCNMHILGNVNEIKNKKKFKILCAKCVVTIKEIIGNDSNLLFTLNLVDNFSNILFNNEK 412
           +  +  I   +       +  I  +K +  I E     S L    NL  + +++  NN K
Sbjct: 441 FMAHSPIAAKILIFVKSNESSIRLSKLLQLICESRSQSSVLKNLQNLAVSINSVNSNNSK 500

Query: 413 NISLNLLKVFSN 424
             +  ++  FS+
Sbjct: 501 AENKKIVANFSH 512

 Score = 16.2 bits (30), Expect = 6.9
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 493 KILKYSLRAISRYSMYINKFIMDDIL 518
           K+L+   +  S  +  I   I+D IL
Sbjct: 184 KLLQNICKNFSTNTFPIQSIILDSIL 209

Lambda     K      H
   0.319    0.137    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 1184
Number of extensions: 66
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 902
Length of database: 629
Length adjustment: 40
Effective length of query: 862
Effective length of database: 589
Effective search space:   507718
Effective search space used:   507718
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 29 (16.2 bits)
S2: 29 (15.8 bits)