Query= PF14_0655 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) RNA helicase-1, putative (398 letters)
>FBgn0001942 type=protein;
           loc=2L:join(5982820..5982821,5983010..5983236,
           5984011..5984624,5984719..5984942,5985026..5985170);
           ID=FBpp0078809; name=eIF-4a-PD;
           parent=FBgn0001942,FBtr0079178;
           dbxref=FlyBase:FBpp0078809,
           FlyBase_Annotation_IDs:CG9075-PD,GB_protein:AAN10568.1,
           GB_protein:AAN10568;
           MD5=5891fcac3bcd1da6b7c83506890f24e3; release=r5.1;
           species=Dmel; length=403;
          Length = 403

 Score =  511 bits (1316), Expect = e-149
 Identities = 259/388 (66%), Positives = 309/388 (79%), Gaps = 2/388 (0%)

Query: 11  ENDIEGNTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSG 70
           E  IE    E+ D FD + L E+LLRGIY YGFEKPSAIQQR I P + G D I QAQSG
Sbjct: 18  EGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAIIPCVRGRDVIAQAQSG 77

Query: 71  TGKTATFVISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTV 130
           TGKTATF I+ LQ I+     CQALILAPTRELA QIQ+VV+ALG+Y+KV  HAC+GGT 
Sbjct: 78  TGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYMKVHSHACIGGTN 137

Query: 131 VREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVF 190
           VRED   L+ G H+VVGTPGRVYDMI+++ L    +KLF+LDEADEMLSRGFK QI +VF
Sbjct: 138 VREDARILESGCHVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSRGFKDQIQDVF 197

Query: 191 KKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKL 250
           K L PD+QV L SATMP ++LE++  FMRDP +ILVKK+ELTLEGI+QFYV V++E WKL
Sbjct: 198 KMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKEELTLEGIKQFYVNVKQENWKL 257

Query: 251 DTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRS 310
            TLCDLY+TL+ITQS+I+CNTR+KVD LTQEM    FTVS MHGDM+Q+DR++IM++FRS
Sbjct: 258 GTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRS 317

Query: 311 GSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNXX 370
           GS+RVL+TTDLLARGIDVQQVSLVINYDLP++ + YIHRIGR GRFGRKGVAINF+T+  
Sbjct: 318 GSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITD-- 375

Query: 371 XXXXXXXXIESYYSTQIEEMPLEVADYL 398
                   IE +Y T IEEMP  +AD +
Sbjct: 376 DDRRILKDIEQFYHTTIEEMPANIADLI 403
Lambda     K      H
   0.321    0.138    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 521
Number of extensions: 19
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 403
Length adjustment: 31
Effective length of query: 367
Effective length of database: 372
Effective search space:   136524
Effective search space used:   136524
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)