>YJL138C TIF2 SGDID:S000003674, Chr X from 154610-153423, reverse
           complement, Verified ORF, "Translation initiation factor
           eIF4A, identical to Tif1p; DEA(D/H)-box RNA helicase
           that couples ATPase activity to RNA binding and
           unwinding; forms a dumbbell structure of two compact
           domains connected by a linker; interacts with eIF4G"
          Length = 395

 Score =  468 bits (1203), Expect = e-136
 Identities = 234/388 (60%), Positives = 304/388 (78%), Gaps = 3/388 (0%)

Query: 11  ENDIEGNTEEIVDTFDALGLNEKLLRGIYSYGFEKPSAIQQRGIKPILNGYDTIGQAQSG 70
           E+ I+ N +++V  FD + L+E LLRG++ YGFE+PSAIQQR I PI+ G+D + QAQSG
Sbjct: 10  ESQIQTNYDKVVYKFDDMELDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSG 69

Query: 71  TGKTATFVISSLQLINYDYVACQALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGTV 130
           TGKT TF I++LQ I+    A QAL+LAPTRELA QIQKVV+AL  ++ +K HAC+GGT 
Sbjct: 70  TGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTS 129

Query: 131 VREDIDKLKQGVHMVVGTPGRVYDMIDKRHLGVDRLKLFILDEADEMLSRGFKAQIYEVF 190
             ED + L+    +VVGTPGRV+D I +R    D++K+FILDEADEMLS GFK QIY++F
Sbjct: 130 FVEDAEGLRDA-QIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIF 188

Query: 191 KKLVPDIQVALFSATMPQEILELTTRFMRDPKTILVKKDELTLEGIRQFYVAVEKEEWKL 250
             L P  QV L SATMP ++LE+TT+FMR+P  ILVKKDELTLEGI+QFYV VE+EE+K 
Sbjct: 189 TLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDELTLEGIKQFYVNVEEEEYKY 248

Query: 251 DTLCDLYETLTITQSIIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRS 310
           + L DLY+++++TQ++I+CNTR+KV+ LT ++ N  FTVS ++ D+ Q++RD IM+EFRS
Sbjct: 249 ECLTDLYDSISVTQAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRS 308

Query: 311 GSTRVLVTTDLLARGIDVQQVSLVINYDLPASPDTYIHRIGRSGRFGRKGVAINFVTNXX 370
           GS+R+L++TDLLARGIDVQQVSLVINYDLPA+ + YIHRIGR GRFGRKGVAINFVTN  
Sbjct: 309 GSSRILISTDLLARGIDVQQVSLVINYDLPANKENYIHRIGRGGRFGRKGVAINFVTN-- 366

Query: 371 XXXXXXXXIESYYSTQIEEMPLEVADYL 398
                   +E +YSTQIEE+P ++A  L
Sbjct: 367 EDVGAMRELEKFYSTQIEELPSDIATLL 394

 Score = 16.2 bits (30), Expect = 1.8
 Identities = 6/18 (33%), Positives = 12/18 (66%), Gaps = 1/18 (5%)

Query: 322 LARGI-DVQQVSLVINYD 338
           ++ GI D+++  +  NYD
Sbjct: 1   MSEGITDIEESQIQTNYD 18

Lambda     K      H
   0.321    0.138    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 485
Number of extensions: 22
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 398
Length of database: 395
Length adjustment: 31
Effective length of query: 367
Effective length of database: 364
Effective search space:   133588
Effective search space used:   133588
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)