>YGL044C RNA15 SGDID:S000003012, Chr VII from 417040-416150, reverse
           complement, Verified ORF, "Cleavage and polyadenylation
           factor I (CF I) component involved in cleavage and
           polyadenylation of mRNA 3' ends; interacts with the
           A-rich polyadenylation signal in complex with Rna14p and
           Hrp1p"
          Length = 296

 Score = 52.4 bits (124), Expect = 4e-11
 Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 1/83 (1%)

Query: 579 VNVKTSSDEENRL-YIQNLPHDLKDEQIKDLLEQFGDLKAFNIIKDLNTGLNKGYGFFEY 637
           VN    ++  +R+ Y+ ++P+D  +EQI DL    G +    ++ D  TG +KGY F E+
Sbjct: 7   VNAGVQNNPPSRVVYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEF 66

Query: 638 EDSSCTQLAIHALNGFVCGQNIL 660
            D   +  A+  LNG+  G   L
Sbjct: 67  RDLESSASAVRNLNGYQLGSRFL 89

 Score = 23.9 bits (50), Expect = 0.014
 Identities = 8/23 (34%), Positives = 16/23 (69%)

Query: 456 RKLYIGNIPPNSKQEDVVDFFNN 478
           R +Y+G+IP +  +E ++D  +N
Sbjct: 18  RVVYLGSIPYDQTEEQILDLCSN 40

 Score = 15.0 bits (27), Expect = 6.4
 Identities = 7/22 (31%), Positives = 12/22 (54%)

Query: 469 QEDVVDFFNNSILAVIKDSSLD 490
           QE+     NNS+  V+  + L+
Sbjct: 232 QEEASATNNNSVNEVVDPAVLN 253

Lambda     K      H
   0.314    0.132    0.374 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 437
Number of extensions: 17
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 3
Length of query: 833
Length of database: 296
Length adjustment: 34
Effective length of query: 799
Effective length of database: 262
Effective search space:   209338
Effective search space used:   209338
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.7 bits)
S2: 26 (14.6 bits)