Query= PF14_0677 Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) RNA 3'-Terminal
Phosphate Cyclase-like protein, putative
(467 letters)
>YOL010W RCL1 SGDID:S000005370, Chr XV from 307939-309042, Verified
ORF, "RNA terminal phosphate cyclase-like protein
involved in rRNA processing at sites A0, A1, and A2;
does not possess detectable RNA cyclase activity"
Length = 367
Score = 65.9 bits (159), Expect = 2e-15
Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 40/203 (19%)
Query: 3 FYGSNFFRLRLALSLISGKAXXXXXXXXXXXXXXXXGMNNEMDIQEELRKNKDGDNYNKY 62
F GS FRLR+ L+ +SGK ++ K + GD
Sbjct: 11 FQGSQNFRLRIVLATLSGKPI-------------------------KIEKIRSGDL--NP 43
Query: 63 GLKEYEAKILKLIDKLCDNTTIKINEEGDELYFEPGYLIGNTNEEDSRNMYNMTFHCGKE 122
GLK+YE L+LI+ + + + I+I+ G + + PG ++G + T C
Sbjct: 44 GLKDYEVSFLRLIESVTNGSVIEISYTGTTVIYRPGIIVGGAS----------THICPSS 93
Query: 123 RSITYYLEFLIMIVLFFKNPVNILLKGITDDYIDNNVYTCKIICEHFFKEILKLNEDFLY 182
+ + Y++E ++ + F K +IL KGIT + D + K + K
Sbjct: 94 KPVGYFVEPMLYLAPFSKKKFSILFKGITASHNDAGIEAIK---WGLMPVMEKFGVRECA 150
Query: 183 INILKRSTKPECSGEVHFFMRNI 205
++ LKR + P GEVH + ++
Sbjct: 151 LHTLKRGSPPLGGGEVHLVVDSL 173
Score = 31.2 bits (69), Expect = 6e-05
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 367 IYERLGFFISLKMINQIKGLSSVDTNYQWLPLLYMALAT-DTSVSKITLSIIKPYSITLI 425
I E LG ++ +++ +I ++V N L ++YM + D +I I I L+
Sbjct: 267 IPEELGEKVACQLLEEISKSAAVGRNQLPLAIVYMVIGKEDIGRLRINKEQIDERFIILL 326
Query: 426 RLLRDFFNVVFKIEKVQKSPIHYSYLIQCVGIGYQNIFKK 465
R ++ FN ++ V ++ + + GIG+ N KK
Sbjct: 327 RDIKKIFNTEVFLKPVDEAD-NEDMIATIKGIGFTNTSKK 365
Score = 17.3 bits (33), Expect = 0.90
Identities = 5/17 (29%), Positives = 10/17 (58%)
Query: 417 IKPYSITLIRLLRDFFN 433
+K Y ++ +RL+ N
Sbjct: 45 LKDYEVSFLRLIESVTN 61
Score = 15.8 bits (29), Expect = 2.6
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 387 SSVDTNYQWLPLLYMA 402
SS Y P+LY+A
Sbjct: 92 SSKPVGYFVEPMLYLA 107
Lambda K H
0.322 0.140 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 331
Number of extensions: 18
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 4
Length of query: 467
Length of database: 367
Length adjustment: 31
Effective length of query: 436
Effective length of database: 336
Effective search space: 146496
Effective search space used: 146496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)