Query= PF14_0677 Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) RNA 3'-Terminal Phosphate Cyclase-like protein, putative (467 letters)
>YOL010W RCL1 SGDID:S000005370, Chr XV from 307939-309042, Verified
           ORF, "RNA terminal phosphate cyclase-like protein
           involved in rRNA processing at sites A0, A1, and A2;
           does not possess detectable RNA cyclase activity"
          Length = 367

 Score = 65.9 bits (159), Expect = 2e-15
 Identities = 51/203 (25%), Positives = 87/203 (42%), Gaps = 40/203 (19%)

Query: 3   FYGSNFFRLRLALSLISGKAXXXXXXXXXXXXXXXXGMNNEMDIQEELRKNKDGDNYNKY 62
           F GS  FRLR+ L+ +SGK                           ++ K + GD     
Sbjct: 11  FQGSQNFRLRIVLATLSGKPI-------------------------KIEKIRSGDL--NP 43

Query: 63  GLKEYEAKILKLIDKLCDNTTIKINEEGDELYFEPGYLIGNTNEEDSRNMYNMTFHCGKE 122
           GLK+YE   L+LI+ + + + I+I+  G  + + PG ++G  +          T  C   
Sbjct: 44  GLKDYEVSFLRLIESVTNGSVIEISYTGTTVIYRPGIIVGGAS----------THICPSS 93

Query: 123 RSITYYLEFLIMIVLFFKNPVNILLKGITDDYIDNNVYTCKIICEHFFKEILKLNEDFLY 182
           + + Y++E ++ +  F K   +IL KGIT  + D  +   K         + K       
Sbjct: 94  KPVGYFVEPMLYLAPFSKKKFSILFKGITASHNDAGIEAIK---WGLMPVMEKFGVRECA 150

Query: 183 INILKRSTKPECSGEVHFFMRNI 205
           ++ LKR + P   GEVH  + ++
Sbjct: 151 LHTLKRGSPPLGGGEVHLVVDSL 173

 Score = 31.2 bits (69), Expect = 6e-05
 Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 2/100 (2%)

Query: 367 IYERLGFFISLKMINQIKGLSSVDTNYQWLPLLYMALAT-DTSVSKITLSIIKPYSITLI 425
           I E LG  ++ +++ +I   ++V  N   L ++YM +   D    +I    I    I L+
Sbjct: 267 IPEELGEKVACQLLEEISKSAAVGRNQLPLAIVYMVIGKEDIGRLRINKEQIDERFIILL 326

Query: 426 RLLRDFFNVVFKIEKVQKSPIHYSYLIQCVGIGYQNIFKK 465
           R ++  FN    ++ V ++  +   +    GIG+ N  KK
Sbjct: 327 RDIKKIFNTEVFLKPVDEAD-NEDMIATIKGIGFTNTSKK 365

 Score = 17.3 bits (33), Expect = 0.90
 Identities = 5/17 (29%), Positives = 10/17 (58%)

Query: 417 IKPYSITLIRLLRDFFN 433
           +K Y ++ +RL+    N
Sbjct: 45  LKDYEVSFLRLIESVTN 61

 Score = 15.8 bits (29), Expect = 2.6
 Identities = 7/16 (43%), Positives = 9/16 (56%)

Query: 387 SSVDTNYQWLPLLYMA 402
           SS    Y   P+LY+A
Sbjct: 92  SSKPVGYFVEPMLYLA 107
Lambda     K      H
   0.322    0.140    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 331
Number of extensions: 18
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 4
Length of query: 467
Length of database: 367
Length adjustment: 31
Effective length of query: 436
Effective length of database: 336
Effective search space:   146496
Effective search space used:   146496
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)