>YLL018C DPS1 SGDID:S000003941, Chr XII from 111574-109901, reverse
           complement, Verified ORF, "Cytoplasmic aspartyl-tRNA
           synthetase, homodimeric enzyme that catalyzes the
           specific aspartylation of tRNA(Asp); class II aminoacyl
           tRNA synthetase; binding to its own mRNA may confer
           autoregulation"
          Length = 557

 Score =  366 bits (940), Expect = e-105
 Identities = 222/528 (42%), Positives = 306/528 (57%), Gaps = 47/528 (8%)

Query: 108 EDINKDNYGYIKVSTLQKYADSIMELYNLEDIYNFFVKSEDCENEKREICVDKNVGDVKD 167
           ED  KDNYG  K+  +Q                    +  D   +KR   VD  + + KD
Sbjct: 68  EDTAKDNYG--KLPLIQS-------------------RDSDRTGQKRVKFVD--LDEAKD 104

Query: 168 AYNEENLLGKKKIWVRGRIHDIRSKGS-IAFIILRHKLYSLQCILDIXXXXXXXXXXX-W 225
           +         K++  R R+H+ R +G+ +AF+ LR +   +Q ++              W
Sbjct: 105 S--------DKEVLFRARVHNTRQQGATLAFLTLRQQASLIQGLVKANKEGTISKNMVKW 156

Query: 226 VSNLSLECIVDIYGEIKKPEIPIDSTNIK-YEIHINKIFCLSKTMKELPFLLKDANMKET 284
             +L+LE IV + G +KK + PI S  ++  EIHI KI+ +S+T + LP LL+DA+  E 
Sbjct: 157 AGSLNLESIVLVRGIVKKVDEPIKSATVQNLEIHITKIYTISETPEALPILLEDASRSEA 216

Query: 285 NDEIT--IKVNQDNRLNNRCFDLRTYANYSIFSLQSVICHIFRTFLLQHNFVEIHTPKLL 342
             E      VN D RL+ R  DLRT  N +IF +Q+ +C +FR +L    F E+HTPKLL
Sbjct: 217 EAEAAGLPVVNLDTRLDYRVIDLRTVTNQAIFRIQAGVCELFREYLATKKFTEVHTPKLL 276

Query: 343 GESSEGGANAFKINYFNQNGYLAQSPQLYKQMCINSGFDKVFEVGPVFRAENSNTYRHLC 402
           G  SEGG++ F++ YF    YLAQSPQ  KQ  I + F++V+E+GPVFRAENSNT+RH+ 
Sbjct: 277 GAPSEGGSSVFEVTYFKGKAYLAQSPQFNKQQLIVADFERVYEIGPVFRAENSNTHRHMT 336

Query: 403 EYVSLDIEMTYKFDYMENVHFYDSMFKHIFKELTNNEKNKTFIKTIKNQYPSDDFVWL-- 460
           E+  LD+EM ++  Y E +     +F  IF EL     ++  I+ ++ QYP ++F     
Sbjct: 337 EFTGLDMEMAFEEHYHEVLDTLSELFVFIFSELPKRFAHE--IELVRKQYPVEEFKLPKD 394

Query: 461 DKTPIFTYEEAIKILIKNGKLFLKEEDILTYDLTTDLEKELGKLIKLSHNTDYYIIINFP 520
            K    TY+E I++L   GK     E     DL+T+ EK LGKL++  ++TD+YI+  FP
Sbjct: 395 GKMVRLTYKEGIEMLRAAGKEIGDFE-----DLSTENEKFLGKLVRDKYDTDFYILDKFP 449

Query: 521 SSLRPFYTMYKEDDPKISNSYDFFMRGEEILSGSQRISDMKLLLENIKLFNLDPNK--LN 578
             +RPFYTM    +PK SNSYDFFMRGEEILSG+QRI D  LL E +K   L P    L 
Sbjct: 450 LEIRPFYTMPDPANPKYSNSYDFFMRGEEILSGAQRIHDHALLQERMKAHGLSPEDPGLK 509

Query: 579 FYIDSFAYSSYPHSGCGIGLERVLMLFLGLNNIRKTSLFPRDPKRLIP 626
            Y D F+Y   PH+G GIGLERV+M +L L NIR+ SLFPRDPKRL P
Sbjct: 510 DYCDGFSYGCPPHAGGGIGLERVVMFYLDLKNIRRASLFPRDPKRLRP 557

Lambda     K      H
   0.322    0.140    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 705
Number of extensions: 23
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 557
Length adjustment: 37
Effective length of query: 589
Effective length of database: 520
Effective search space:   306280
Effective search space used:   306280
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.4 bits)
S2: 27 (15.0 bits)