>YKL080W VMA5 SGDID:S000001563, Chr XI from 284674-285852, Verified
           ORF, "Subunit C of the eight-subunit V1 peripheral
           membrane domain of vacuolar H+-ATPase (V-ATPase), an
           electrogenic proton pump found throughout the
           endomembrane system; required for the V1 domain to
           assemble onto the vacuolar membrane"
          Length = 392

 Score = 89.4 bits (220), Expect = 2e-22
 Identities = 80/337 (23%), Positives = 150/337 (44%), Gaps = 20/337 (5%)

Query: 50  KFCSFDDLLKCADDLQKYDSYAYGCLKKIEKIAKEYDENIELKIIYQRQHIN---IDQYI 106
           K  S D L+  +++L K D+     + KI +I +  +E       Y+   IN   + +Y+
Sbjct: 54  KIGSLDTLIVESEELSKVDNQIGASIGKIIEILQGLNETSTNA--YRTLPINNMPVPEYL 111

Query: 107 RRFTWDDAKYPRSRSLTDTIDVMINNITKLSDEIQIKSSMLNDLXXXXXXXVPKNDSNNF 166
             F W   K+   +S+ D I ++ N  ++L  +++   +  N           K  + + 
Sbjct: 112 ENFQWQTRKFKLDKSIKDLITLISNESSQLDADVRATYANYNSAKTNLAAAERKK-TGDL 170

Query: 167 FLRNLNEILTPQTVSETDFI-ETEYLTTLIAYVPKNSIDDWLNNYEKFSSYVVPRSTEQF 225
            +R+L++I+ P+     DF+  +E+LTT++  VPK+   D+  +YE  S  VVP S    
Sbjct: 171 SVRSLHDIVKPE-----DFVLNSEHLTTVLVAVPKSLKSDFEKSYETLSKNVVPASA--- 222

Query: 226 KDLIDKDGN-TLWXXXXXXXXXXXXXXXXXXXXXXXXXXXYDEKQYNDMMESRTKVEAEI 284
             +I +D    L+                           Y E+  + + +      +  
Sbjct: 223 -SVIAEDAEYVLFNVHLFKKNVQEFTTAAREKKFIPREFNYSEELIDQLKKEHDSAASLE 281

Query: 285 IRQETFLRRMCLAAFSDIFIAFIHINILRVFCESVLRFGVPPNFASFSIRINGESKEKKV 344
                 L R+   A+ D+FI + HI  LRV+ ESVLR+G+PP+F    I +  ++   K 
Sbjct: 282 QSLRVQLVRLAKTAYVDVFINWFHIKALRVYVESVLRYGLPPHFNIKIIAVPPKNL-SKC 340

Query: 345 RKKLYDIFS--SSDSIGKNYIKRSDENDEEIYPYVSV 379
           + +L D F     ++  K+   + ++ D  ++ Y S+
Sbjct: 341 KSELIDAFGFLGGNAFMKDKKGKINKQDTSLHQYASL 377

 Score = 15.0 bits (27), Expect = 3.9
 Identities = 4/9 (44%), Positives = 6/9 (66%)

Query: 210 YEKFSSYVV 218
           YE F  Y++
Sbjct: 382 YEPFVMYII 390

Lambda     K      H
   0.321    0.137    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 328
Number of extensions: 17
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 383
Length of database: 392
Length adjustment: 30
Effective length of query: 353
Effective length of database: 362
Effective search space:   127786
Effective search space used:   127786
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)