Query= PFA0400c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) beta3
proteasome subunit, putative
(204 letters)
>FBgn0026380 type=protein; loc=3R:complement(4831176..4831793);
ID=FBpp0081488; name=Prosbeta3-PA;
parent=FBgn0026380,FBtr0082010;
dbxref=FlyBase:FBpp0081488,
FlyBase_Annotation_IDs:CG11981-PA,GB_protein:AAF54320.1,
GB_protein:AAF54320;
MD5=da26ef1a63faed6bd81accf1b43b8670; release=r5.1;
species=Dmel; length=205;
Length = 205
Score = 172 bits (437), Expect = 3e-48
Identities = 90/204 (44%), Positives = 127/204 (62%), Gaps = 12/204 (5%)
Query: 1 MSGSNCVAIACDLRLGANTFTTVSTKFSKIFKMNNNVYVGLSGLATDIQTLYEILRYRVN 60
M G +CVAIA D R G T+ST F K+F + +++GL+GL TDI T+ + L +R N
Sbjct: 14 MRGKDCVAIATDHRFGIQA-QTISTDFKKVFHIGPRMFLGLTGLQTDILTVRDRLMFRKN 72
Query: 61 LYEVRQDAEMDVECFANMLSSILYSNRFSPYFVNPIVVGFKLKHYVDEEGEKKVNYEPYL 120
LYE R++ EM + F+ M+SS LY +RF PYF+ P+V G K EP++
Sbjct: 73 LYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLDPK-----------TMEPFI 121
Query: 121 TAYDLIGAKCETRDFVVNGVTSEQLFGMCESLYVKDQDENGLFETISQCLLSALDRDCIS 180
DLIG DFVV G +EQL+GMCE+L+ D + + LFE I+Q +++A DRD +S
Sbjct: 122 CNMDLIGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAFDRDAMS 181
Query: 181 GWGAEVLVLTPEKIIKKKLKARMD 204
GWGA V ++ +KI ++ LK RMD
Sbjct: 182 GWGATVYIIEKDKITERTLKTRMD 205
Score = 15.8 bits (29), Expect = 0.60
Identities = 3/12 (25%), Positives = 9/12 (75%)
Query: 169 CLLSALDRDCIS 180
C+++ +DC++
Sbjct: 10 CVVAMRGKDCVA 21
Lambda K H
0.321 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 150
Number of extensions: 8
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 204
Length of database: 205
Length adjustment: 21
Effective length of query: 183
Effective length of database: 184
Effective search space: 33672
Effective search space used: 33672
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)