Query= PFA0450c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) mRNA cleavage
factor-like protein, putative
(232 letters)
>YNL173C MDG1 SGDID:S000005117, Chr XIV from 310059-308959,
reverse complement, Verified ORF, "Plasma membrane
protein involved in G-protein mediated pheromone
signaling pathway; overproduction suppresses bem1
mutations"
Length = 366
Score = 34.3 bits (77), Expect = 3e-06
Identities = 15/35 (42%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 24 GEWLLYPQSNYEFNIDEKLKNKFIIDKEKCKKRIN 58
G+WL P +Y+ NIDE ++N FI +++ K+R N
Sbjct: 65 GQWL--PSKDYKVNIDEGVENNFITEEDVIKQREN 97
Score = 13.9 bits (24), Expect = 4.7
Identities = 5/15 (33%), Positives = 8/15 (53%)
Query: 49 DKEKCKKRINAYNKN 63
D E +++N KN
Sbjct: 159 DSEDETQQVNKTGKN 173
Lambda K H
0.323 0.141 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 159
Number of extensions: 7
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 232
Length of database: 366
Length adjustment: 26
Effective length of query: 206
Effective length of database: 340
Effective search space: 70040
Effective search space used: 70040
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.1 bits)
S2: 22 (13.1 bits)