Query= PFA0530c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein, conserved
(186 letters)
>YDL166C FAP7 SGDID:S000002325, Chr IV from 164043-163450, reverse
complement, Verified ORF, "Essential nuclear protein,
involved in the oxidative stress response"
Length = 197
Score = 69.7 bits (169), Expect = 3e-17
Identities = 48/180 (26%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 2 KRKVPNIIITGVPGSGKSTXXXXXXXXXXXXXXXRNDMEGFEMTHLNLSNIIKDERLYKE 61
+R PNII+TG PG GKS+ +N ++ ++ + N+S+ KD ++
Sbjct: 4 RRYGPNIIVTGTPGCGKSSTCEFL----------KNKLKDYK--YYNISDFAKDNDCFEG 51
Query: 62 FDDELDASIYSXXXXXXXXXXXXXXXXGGYIIDFHDINFVKDVDIIDKIFLLTIQTNFLY 121
+D+ + I G I+D+H +N V +ID + +L + LY
Sbjct: 52 YDEGRKSHIVDEDKLLDMLEPLLRQ--GNSIVDWH-VNDVFPERLIDLVVVLRCDNSNLY 108
Query: 122 ERLEKRNYTKEKIKNNIECEIFQVIKEDILDHFPNTNILQEIENNDLQQYDNNLSIIKNW 181
RL R Y KI+ N++ EI V+K+D ++ + +I+ E++++ + +N+S I W
Sbjct: 109 SRLHARGYHDSKIEENLDAEIMGVVKQDAVESY-EPHIVVELQSDTKEDMVSNVSRIVAW 167
Lambda K H
0.319 0.141 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 106
Number of extensions: 5
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 186
Length of database: 197
Length adjustment: 20
Effective length of query: 166
Effective length of database: 177
Effective search space: 29382
Effective search space used: 29382
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.1 bits)
S2: 18 (11.5 bits)