Query= PFA0580c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) TatD-like
deoxyribonuclease, putative
(434 letters)
>YBL055C YBL055C SGDID:S000000151, Chr II from 116832-115576,
reverse complement, Uncharacterized ORF, "Hypothetical
protein"
Length = 418
Score = 153 bits (386), Expect = 1e-41
Identities = 114/397 (28%), Positives = 184/397 (46%), Gaps = 68/397 (17%)
Query: 64 DNESSFIDIGSNLTDKMFDGVYNSKK-HENDLQNVLNRAKNNNVDKIIITCTCLAEIDKS 122
D+ + DIG NLTD MF G+YN K+ H D +L RA +V ++T + +AE +
Sbjct: 33 DSPLKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSA 92
Query: 123 LKICETY-DPEGKFLYLSAGVHPTNCYEFIDXXXXXXXXXXXXXXXXXXXXXXXXXQVEN 181
+++ + D LY + GVHP EF D ++N
Sbjct: 93 IELVSSVKDLSPLKLYHTIGVHPCCVNEFADASQGDKASA----------------SIDN 136
Query: 182 SKMENGNKKICDGEKDMXXXXXXXXXXXXDTIPGFKYNEKDKEYLENLKNKIIKYPNRIV 241
M+ + + + P F K KE + + + +
Sbjct: 137 PSMDEAYNESLYAK--------------VISNPSFAQG-KLKELYDLMNQQAKPHDTSFR 181
Query: 242 CIGEIGLDFDRLYFCSKYIQIKYFIFQLKLV----QMFNLPMFLHMRNCSETFFKIVDIY 297
IGEIGLD+DR ++ SK +Q +F QLK+ ++ + P+FLHMR+ + F +I++ +
Sbjct: 182 SIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILERF 241
Query: 298 ---------KFLFEKNGG---------------VIHSFTDKEDIVHIIVQNYKNLYIGVN 333
F +K G V+HSFT + ++ N++IGVN
Sbjct: 242 IAGFTDERDTFQLQKLGASSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPNIFIGVN 301
Query: 334 GCSLKSLENINAVKKIPLNLLLLETDAPWCGVKKTHASYEYIKDTYEKR-----AYTNLX 388
GCSL++ EN+ VK+IP LLLETDAPWC +K+THAS++Y+ E R A+ ++
Sbjct: 302 GCSLRTEENLAVVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEYPAFKSVK 361
Query: 389 XXXXXXXCDDNTIF--KERNEPYNIADIAEITYKVRE 423
+ ++ K RNEP N+ +A + +V++
Sbjct: 362 KNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKD 398
Lambda K H
0.322 0.140 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 432
Number of extensions: 26
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 434
Length of database: 418
Length adjustment: 32
Effective length of query: 402
Effective length of database: 386
Effective search space: 155172
Effective search space used: 155172
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 25 (14.4 bits)
S2: 25 (14.2 bits)