Query= PFB0125c Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) hypothetical
protein
(1353 letters)
>YJL020C BBC1 SGDID:S000003557, Chr X from 402327-398854, reverse
complement, Verified ORF, "Protein possibly involved in
assembly of actin patches; interacts with an actin
assembly factor Las17p and with the SH3 domains of Type
I myosins Myo3p and Myo5p; localized predominantly to
cortical actin patches"
Length = 1157
Score = 42.7 bits (99), Expect = 2e-07
Identities = 44/174 (25%), Positives = 68/174 (39%), Gaps = 12/174 (6%)
Query: 547 PRRNFEEIDENYKEVVEEKFDEKMGENFFEEVEEKYDEKVGKNIFE--------EVEEKF 598
P EE +EN K + +F + N ++E +++ K E E E+
Sbjct: 302 PYTETEEAEENEKTEPKPEFTPETEHNEEPQMELLAHKEITKTSREADEGTNDIEKEQFL 361
Query: 599 DEKMRENIFAEIEEEKYDEKMGENIFEEVEENFG--EKVGKNIFEEVEEKFDEKMGXXXX 656
DE +EN ++EE + DE GEN+ EE E +G ++ G N E+ EE +E
Sbjct: 362 DEYTKEN--QKVEESQADEARGENVAEESEIGYGHEDREGDNDEEKEEEDSEENRRAALR 419
Query: 657 XXXXXXXXXXMGXXXXXXXXXXXXXXMGENIFEEIPKKDDVEIEETYSEKMWEI 710
+G EE KK E EE E++ E+
Sbjct: 420 ERMAKLSGASRFGAPVGFNPFGMASGVGNKPSEEPKKKQHKEKEEEEPEQLQEL 473
Score = 33.1 bits (74), Expect = 2e-04
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 689 EEIPKKDDVEIEETYSEKMWEIHDEKIKDKYDEPYEKIHDEKKEVEEFFLIADKK----- 743
E+ ++ V E Y+E +EK + K + E H+E+ ++E L+A K+
Sbjct: 289 EQEHERSAVNKNEPYTETEEAEENEKTEPKPEFTPETEHNEEPQME---LLAHKEITKTS 345
Query: 744 KEENEDSNVEILNIDKNNFYFE-NKETFEIDE-KVSKMNEEDFVYENNETFECEDIFLKR 801
+E +E +N +I+K F E KE +++E + + E+ E+ + ED R
Sbjct: 346 READEGTN----DIEKEQFLDEYTKENQKVEESQADEARGENVAEESEIGYGHED----R 397
Query: 802 EDNDDSENEKEIDE 815
E ++D E E+E E
Sbjct: 398 EGDNDEEKEEEDSE 411
Score = 28.1 bits (61), Expect = 0.005
Identities = 46/207 (22%), Positives = 80/207 (38%), Gaps = 47/207 (22%)
Query: 456 NKKFDEHNVFEKNEIYEPKNVY--ENENYDQKDVDESSKFFENNVFFWDDKNKNVDEIID 513
N+ + E E+NE EPK + E E+ ++ ++ + +K + +
Sbjct: 300 NEPYTETEEAEENEKTEPKPEFTPETEHNEEPQMELLA-------------HKEITKTSR 346
Query: 514 SGVEGNCDVXXXXXXXXXXTYFVETGINYGDELPRRNFEEIDENYKEVVEEKFDEKMGEN 573
EG D+ + DE + N ++V E + DE GEN
Sbjct: 347 EADEGTNDIEKE---------------QFLDEYTKEN--------QKVEESQADEARGEN 383
Query: 574 FFEEVEEKY--DEKVGKNIFEEVEEKFDEK----MRENIFAEIEEEKYDEKMGENIF--- 624
EE E Y +++ G N E+ EE +E +RE + ++ +G N F
Sbjct: 384 VAEESEIGYGHEDREGDNDEEKEEEDSEENRRAALRERMAKLSGASRFGAPVGFNPFGMA 443
Query: 625 EEVEENFGEKVGKNIFEEVEEKFDEKM 651
V E+ K +E EE+ E++
Sbjct: 444 SGVGNKPSEEPKKKQHKEKEEEEPEQL 470
Score = 27.3 bits (59), Expect = 0.009
Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 10/124 (8%)
Query: 767 KETFEIDEKVSKMNEEDFVYENNETFECEDIFLKREDNDDSENEKEIDEIGEVINIGKYH 826
K E + + S +N+ + E E E E K E + E E +E ++ +
Sbjct: 285 KAKLEQEHERSAVNKNEPYTETEEAEENE----KTEPKPEFTPETEHNEEPQMELLAHKE 340
Query: 827 LNNKNNSYDDVHILTHDFKNELLIEKYNVDNICSDDNIYD---GDNICGDDNIYDGDNIY 883
+ + D+ T+D + E +++Y +N +++ D G+N+ + I G
Sbjct: 341 ITKTSREADEG---TNDIEKEQFLDEYTKENQKVEESQADEARGENVAEESEIGYGHEDR 397
Query: 884 SGDN 887
GDN
Sbjct: 398 EGDN 401
Score = 20.4 bits (41), Expect = 1.0
Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 2/84 (2%)
Query: 407 NGNEKYQNVFDSNKDNLENINVEDPPFSNFSEEKQNFFQNCDMSENIWLNKKFDEHNVFE 466
N NE Y ++ ++ E P + +EE Q + E +++ DE
Sbjct: 298 NKNEPYTETEEAEENEKTEPKPEFTPETEHNEEPQ--MELLAHKEITKTSREADEGTNDI 355
Query: 467 KNEIYEPKNVYENENYDQKDVDES 490
+ E + + EN+ ++ DE+
Sbjct: 356 EKEQFLDEYTKENQKVEESQADEA 379
Score = 19.6 bits (39), Expect = 1.8
Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
Query: 408 GNEKYQNVFDSNKDNLENINVEDPPFSNFSEEKQNFFQN 446
GN + +NV ++ E I ++PP S+ + E + +N
Sbjct: 574 GNNESENV-----NSGEKIYPQEPPISHRTAEVSHDIEN 607
Score = 18.5 bits (36), Expect = 4.0
Identities = 49/264 (18%), Positives = 90/264 (34%), Gaps = 72/264 (27%)
Query: 689 EEIPKKDDVEIEETYSEKMWEIHDEKIKDKYDEPYEKIHDEKKEVEEFFLIADKKKEEN- 747
E + K+ + E +I E+ D+Y + +K+ + + AD+ + EN
Sbjct: 334 ELLAHKEITKTSREADEGTNDIEKEQFLDEYTKENQKVEESQ---------ADEARGENV 384
Query: 748 -EDSNVEILNIDKNNFYFENKETFEIDE-KVSKMNEEDFVYENNETFEC----------- 794
E+S + + D+ E KE + +E + + + E F
Sbjct: 385 AEESEIGYGHEDREGDNDEEKEEEDSEENRRAALRERMAKLSGASRFGAPVGFNPFGMAS 444
Query: 795 -------EDIFLKREDNDDSENEKEIDEIGEVINI------------GKYHLNNKNNSYD 835
E+ K+ + E +++ E+ I + K +L+ KN +
Sbjct: 445 GVGNKPSEEPKKKQHKEKEEEEPEQLQELPRAIPVMPFVDPSSNPFFRKSNLSEKNQPTE 504
Query: 836 ----DVHILT-HDFKNELLIEKYN----VDNICSDDNIYDGDNICGDDNIYDG------- 879
D H T H+ K E Y+ VDN + + +D D D D
Sbjct: 505 TKTLDPHATTEHEQKQEHGTHAYHNLAAVDNAHPEYSDHDSDEDTDDHEFEDANDGLRKH 564
Query: 880 --------------DNIYSGDNIY 889
+N+ SG+ IY
Sbjct: 565 SMVEQAFQIGNNESENVNSGEKIY 588
Score = 18.5 bits (36), Expect = 4.0
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 458 KFDEHNVFEKNEI 470
KF+ H KNEI
Sbjct: 1082 KFEAHKKIGKNEI 1094
Score = 18.1 bits (35), Expect = 5.2
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 942 ENLLKEHKIAVNESEEIAQDIKEKYEKRDNE 972
EN+ +E +I + + +EK E+ E
Sbjct: 382 ENVAEESEIGYGHEDREGDNDEEKEEEDSEE 412
Score = 17.3 bits (33), Expect = 8.8
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 1000 EYSEKYMDNNIEDNE 1014
EYS+ D + +D+E
Sbjct: 539 EYSDHDSDEDTDDHE 553
Lambda K H
0.312 0.134 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3500
Number of extensions: 253
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 12
Length of query: 1353
Length of database: 1157
Length adjustment: 48
Effective length of query: 1305
Effective length of database: 1109
Effective search space: 1447245
Effective search space used: 1447245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 33 (17.8 bits)
S2: 33 (17.3 bits)