Query= PFB0200c Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) aspartate
aminotransferase, putative
(405 letters)
>YLR027C AAT2 SGDID:S000004017, Chr XII from 198086-196830, reverse
complement, Verified ORF, "Cytosolic aspartate
aminotransferase, involved in nitrogen metabolism;
localizes to peroxisomes in oleate-grown cells"
Length = 418
Score = 181 bits (459), Expect = 4e-50
Identities = 109/405 (26%), Positives = 201/405 (49%), Gaps = 14/405 (3%)
Query: 4 LLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADKLVTENY 63
L +++E + D + + + +D K++L IG +D+G + SV A+KL+ +
Sbjct: 5 LFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDS 64
Query: 64 KEKPYLLG-NGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFL-KMLN 121
LG G ++ +IFG S ++ ++ ++Q + GTGA+ + +F K
Sbjct: 65 SYNHEYLGITGLPSLTSNAAKIIFGTQSDAFQEDRVISVQSLSGTGALHISAKFFSKFFP 124
Query: 122 VETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQI 181
+ +Y++ P + NH+ + E++G ++ ++ + FLN ++ P GS +L
Sbjct: 125 DKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHS 184
Query: 182 SCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNIAF 241
+NP ++ + + +I++ + K H+ +FD AYQGF +L++D +R EK
Sbjct: 185 CAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV 244
Query: 242 S---VCQSFSKNMSLYGERAGALHIVCKNQEEKK----IVFNNLCFIVRKFYSSPVIHTX 294
S VCQSF+KN +YGER G H+ Q + K V + L I+R S+P +
Sbjct: 245 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGA 304
Query: 295 XXXXXXXXXXXXXXXWIKELSQLSQRITNNRILFFNKLETYQKKYNLNYDWNVYKKQRGL 354
W K++ +S RIT R + L + K +W+ Q G+
Sbjct: 305 KIVAKLLETPELTEQWHKDMVTMSSRITKMR----HALRDHLVKLGTPGNWDHIVNQCGM 360
Query: 355 FSFVPLLAKIAEHL-KTHHIYIINNGRINVSGITKNNVDYIADKI 398
FSF L ++ + L +TH +Y++ +GR +++G+ + NV+Y+A I
Sbjct: 361 FSFTGLTPQMVKRLEETHAVYLVASGRASIAGLNQGNVEYVAKAI 405
Lambda K H
0.322 0.140 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 362
Number of extensions: 18
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 418
Length adjustment: 31
Effective length of query: 374
Effective length of database: 387
Effective search space: 144738
Effective search space used: 144738
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 24 (14.0 bits)
S2: 24 (13.9 bits)