>YJL140W RPB4 SGDID:S000003676, Chr X from 150880-151545, Verified
           ORF, "RNA polymerase II subunit B32; forms two subunit
           dissociable complex with Rpb7p; dispensable under some
           environmental conditions; involved in export of mRNA to
           cytoplasm under stress conditions"
          Length = 221

 Score = 38.5 bits (88), Expect = 6e-08
 Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 51  IKSSYDYANKFAAIKNRSSIVDIRTNLERIGDLHEYEIAMLVNLLPKTILEARYLIPSL- 109
           +K++  Y   F+  +++ ++  +   L+  G LH +E+A L +L   T  EA+ LIPSL 
Sbjct: 141 LKNTMQYLTNFSRFRDQETVGAVIQLLKSTG-LHPFEVAQLGSLACDTADEAKTLIPSLN 199

Query: 110 IRLNDETLNSILEHL 124
            +++D+ L  IL+ L
Sbjct: 200 NKISDDELERILKEL 214

 Score = 15.0 bits (27), Expect = 0.70
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 25 NLCELQLILGDQLRLTSKRNEEAQAL 50
          N   LQL    QL+  + + EE + +
Sbjct: 23 NAATLQLGQEFQLKQINHQGEEEELI 48

Lambda     K      H
   0.320    0.137    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 132
Length of database: 221
Length adjustment: 18
Effective length of query: 114
Effective length of database: 203
Effective search space:    23142
Effective search space used:    23142
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.2 bits)
S2: 18 (11.5 bits)