>YDR045C RPC11 SGDID:S000002452, Chr IV from 548307-547975, reverse
           complement, Verified ORF, "RNA polymerase III subunit
           C11; mediates pol III RNA cleavage activity and is
           important for termination of transcription"
          Length = 110

 Score = 73.2 bits (178), Expect = 9e-19
 Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 7/111 (6%)

Query: 1   MAFFCPNCHNIVLVHI-EKGVY-FYCKSCXXXXXXXXXXXXXFDCQQFNKTIPLDAVDIN 58
           M  FCP+C+N++L+   + GVY   C+SC             +D ++  +    D +   
Sbjct: 1   MLSFCPSCNNMLLITSGDSGVYTLACRSCPYEFPIEGIEI--YDRKKLPRKEVDDVLGGG 58

Query: 59  NKNMSKTQAVCPK---CTNDEAYFYTLQIRSADEPSTIFYICVKCNYHWKE 106
             N+ +T+  CP    C  + AYF+ LQIRSADEP T FY CV C + WKE
Sbjct: 59  WDNVDQTKTQCPNYDTCGGESAYFFQLQIRSADEPMTTFYKCVNCGHRWKE 109

Lambda     K      H
   0.328    0.138    0.477 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 110
Length adjustment: 12
Effective length of query: 94
Effective length of database: 98
Effective search space:     9212
Effective search space used:     9212
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.6 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.5 bits)
S2: 14 (10.0 bits)