Query= PFB0370c Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) RNA-binding
protein, putative
(300 letters)
>FBgn0020305 type=protein; loc=2L:complement(868739..869776);
ID=FBpp0077694; name=dbe-PA;
parent=FBgn0020305,FBtr0078030;
dbxref=FlyBase:FBpp0077694,
FlyBase_Annotation_IDs:CG4258-PA,GB_protein:AAF51440.1,
GB_protein:AAF51440;
MD5=c320a2c1f10562df87d406c67482a003; release=r5.1;
species=Dmel; length=345;
Length = 345
Score = 244 bits (622), Expect = 3e-69
Identities = 121/257 (47%), Positives = 166/257 (64%), Gaps = 2/257 (0%)
Query: 24 ENIDHWKVEKFTQEDNKHHFLEESSFKVLFPKYREKYLQQFSSDIKNVLNKHFIKFEIDL 83
+N K+ F QEDN H +EESSF LFPKYRE+YL++ ++ L +H +K E+DL
Sbjct: 17 DNAWSMKIPAFRQEDNPHGMVEESSFATLFPKYRERYLKEVWPLVEQCLAEHHLKAELDL 76
Query: 84 IEGYMCVKTTKKTFDPYIIIKSRDMISLLSRSVPFVHAKRVLEDETYCDIIKISGYVRNK 143
+EG M VKT++KT+DPYIIIK+RDMI L++RSVPF AKRVL+D+ CDIIKI V K
Sbjct: 77 MEGSMVVKTSRKTWDPYIIIKARDMIKLMARSVPFEQAKRVLQDDIGCDIIKIGNLVHKK 136
Query: 144 NKFIKRRQRLLGSNATTLKALEILTNCYICIHGKTVSVIGHFKSLKVVRRIIIDCMKNIH 203
KF+KRRQRL+G N TLK++E+LT+CY+ + G TVS +G +K L+ VR I+++ M N+H
Sbjct: 137 EKFVKRRQRLIGPNGATLKSIELLTDCYVLVQGNTVSALGPYKGLQQVRDIVLETMNNVH 196
Query: 204 PVYHIKELIAKRXXXXXXXXXXXXXXXXXPNFKKRNVQRXXXXXXXXXXXXXXXSVFPPD 263
P+Y+IK L+ KR P FK +N+ + + FPP
Sbjct: 197 PIYNIKALMIKRELMKDPRLANEDWSRFLPKFKNKNISK--RKQPKVKKQKKEYTPFPPS 254
Query: 264 QLPRKIDIQMETGEYFL 280
Q K+D Q+ +GEYFL
Sbjct: 255 QPESKVDKQLASGEYFL 271
Lambda K H
0.323 0.139 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 262
Number of extensions: 8
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 345
Length adjustment: 28
Effective length of query: 272
Effective length of database: 317
Effective search space: 86224
Effective search space used: 86224
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 22 (13.1 bits)
S2: 22 (13.1 bits)