Query= PFB0635w Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) T-complex
protein 1, putative
(524 letters)
>FBgn0033342 type=protein;
loc=2R:complement(4792534..4793083,4793148..4794178,
4794358..4794417); ID=FBpp0087764; name=CG8258-PA;
parent=FBgn0033342,FBtr0088683;
dbxref=FlyBase:FBpp0087764,
FlyBase_Annotation_IDs:CG8258-PA,GB_protein:AAF59029.3,
GB_protein:AAF59029;
MD5=7dde112ff52bde845483a1ed89d6deb5; release=r5.1;
species=Dmel; length=546;
Length = 546
Score = 299 bits (765), Expect = 2e-85
Identities = 162/524 (30%), Positives = 286/524 (54%), Gaps = 8/524 (1%)
Query: 5 EDTILKNIEACKEICNILQTSLGPKCMXXXXXXXXXXXXVSSDCITILNDMEINHPVVNI 64
E+ + +NI ACKE ++++ GP M V+SD TI+ ++++ HP +
Sbjct: 26 EEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDVEHPAAKL 85
Query: 65 LKKLSETINYEYGDFTNYAFTITCEILDKASFLIQQGFNINDILNGFVLGYKEIEKVLEE 124
+ S+ + E GD TN+ + +L+ A L++ G +I +G+ ++ ++L
Sbjct: 86 IVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPN 145
Query: 125 MIVWKVPNFYEEKELIKVLKSVMLTKNISNNYNFLIQLLAKCISTLMPEKIEDFDVDNIR 184
++ K+ ++ +++ +VL++ +++K +FL L++K +++P++ F+VDNIR
Sbjct: 146 LVSHKIEDYRNVEKVKEVLRTSIMSKQYGQE-DFLNDLVSKACVSILPDE-GTFNVDNIR 203
Query: 185 VSKLNGGNIIDSEFLMGMVIAREANGIIKKKENANVIVLNCGLEGPTTETKGTVLLHNAE 244
+ K+ G + SE + GMV R G + E A +++ +C ++ TETKGTVL+ +A+
Sbjct: 204 ICKILGSGLTKSEVVRGMVFKRFVEGDVTYAEKAKIVIFSCPVDIIQTETKGTVLIKSAD 263
Query: 245 ELINYTKGEELQMKKYIDNFKKANVDVIIVNGAISDIAQHFCDTNNIMTLKITSKFETLR 304
EL++++ GEE ++ I A V V++ G + D+A HF + +M +++ SKF+ R
Sbjct: 264 ELLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAVRLNSKFDLRR 323
Query: 305 ICXXXXXXXXXXXXTPQPEDIGKVSSIYVSEIASKKVTIINS--KNKKVGTIILRGATFN 362
+ TP E++G + + E+ + + K+ ++ T+++RGAT N
Sbjct: 324 LSRSVNATVLPRITTPSQEELGYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIRGATDN 383
Query: 363 LLDEVERCIHDGINSIKNAIKGNAFLHGGGCVEIQLCLALKKYANQLKGVDNYCVKIFAE 422
+D++ER + D IN+ K + +L G G EI+L L YA+ L G+D Y V+ FA
Sbjct: 384 FMDDIERALDDAINNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFAN 443
Query: 423 AFYIIPKILARNAGYNTTDVLNELINEHNK--GNTHSC-ININKDSHITSAQNNHIYDNY 479
A + PK LA N+G N T+++N+L HN G T I K S I + + ++D Y
Sbjct: 444 ALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAK-LFDLY 502
Query: 480 NCKKYAIHLAMEAVQTILKIDQIIMSKPAGGPKPRDKNPDYDEA 523
K + + A+ A TILK+DQIIM+K AGGPK R DE+
Sbjct: 503 QSKFWGLKYAVGAAATILKVDQIIMAKRAGGPKVRQAAGSDDES 546
Lambda K H
0.318 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 627
Number of extensions: 34
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 546
Length adjustment: 35
Effective length of query: 489
Effective length of database: 511
Effective search space: 249879
Effective search space used: 249879
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)