Query= PFB0635w Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) T-complex
protein 1, putative
(524 letters)
>YJL008C CCT8 SGDID:S000003545, Chr X from 421579-419873, reverse
complement, Verified ORF, "Subunit of the cytosolic
chaperonin Cct ring complex, related to Tcp1p, required
for the assembly of actin and tubulins in vivo"
Length = 568
Score = 302 bits (774), Expect = 2e-86
Identities = 180/547 (32%), Positives = 297/547 (54%), Gaps = 28/547 (5%)
Query: 3 NNEDTILKNIEACKEICNILQTSLGPKCMXXXXXXXXXXXXVSSDCITILNDMEINHPVV 62
N + I+K+I A +E+ + TS+GP +++D T+L +++I HP V
Sbjct: 23 NADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHPAV 82
Query: 63 NILKKLSETINYEYGDFTNYAFTITCEILDKASFLIQQGFNINDILNGFVLGYKEIEKVL 122
+L +E + GD TN + E+L+ + LI G + +I+ G+ + K K L
Sbjct: 83 KVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKEL 142
Query: 123 EEMIVWKVPNFYEEKELIKVLKSVMLTKNISNNYNFLIQLLAKCISTLMPE-----KIED 177
+EM+V ++ + ++ EL+K++K V+ +K + + L +L+++ +S ++P +I
Sbjct: 143 DEMVVGEITDKNDKNELLKMIKPVISSKKYGSE-DILSELVSEAVSHVLPVAQQAGEIPY 201
Query: 178 FDVDNIRVSKLNGGNIIDSEFLMGMVIAREANGIIK---KKENANVIVLNCGLEGPTTET 234
F+VD+IRV K+ GG++ +S + GMV RE G +K + + V V C L+ TET
Sbjct: 202 FNVDSIRVVKIMGGSLSNSTVIKGMVFNREPEGHVKSLSEDKKHKVAVFTCPLDIANTET 261
Query: 235 KGTVLLHNAEELINYTKGEELQMKKYIDNFKKANVDVIIVNGAISDIAQHFCDTNNIMTL 294
KGTVLLHNA+E+++++KGEE Q+ + V+ I+ + ++A H+ + I+ L
Sbjct: 262 KGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGILVL 321
Query: 295 KITSKFETLRICXXXXXXXXXXXXTPQPEDIGKVSSIYVSEIASKKVTIINSKN---KKV 351
K+ SKFE R+C P PE++G V ++ EI +VT+ + +
Sbjct: 322 KVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRT 381
Query: 352 GTIILRGATFNLLDEVERCIHDGINSIKNAIK--GNAFLHGGGCVEIQLCLALKKYANQL 409
TIILRGAT N LD++ER I DG+ ++K +K G L G G EI+L + KY +
Sbjct: 382 STIILRGATQNNLDDIERAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERT 441
Query: 410 KGVDNYCVKIFAEAFYIIPKILARNAGYNTTDVLNELINEHN--------KGNTHSCINI 461
G+ +K FA AF ++P+ LA AG + +VL L HN + + ++I
Sbjct: 442 PGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNLYAAHNVTEPGAVKTDHLYKGVDI 501
Query: 462 N--KDSHITSAQNNHIYDNYNCKKYAIHLAMEAVQTILKIDQIIMSKPAGGPK----PRD 515
+ D + + +IYD KK+AI++A EA T+L IDQIIM+K AGGP+ PR
Sbjct: 502 DGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAPQGPRP 561
Query: 516 KNPDYDE 522
N D ++
Sbjct: 562 GNWDQED 568
Score = 15.0 bits (27), Expect = 7.9
Identities = 5/12 (41%), Positives = 10/12 (83%)
Query: 2 KNNEDTILKNIE 13
KN+++ +LK I+
Sbjct: 153 KNDKNELLKMIK 164
Lambda K H
0.318 0.136 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 645
Number of extensions: 34
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 524
Length of database: 568
Length adjustment: 35
Effective length of query: 489
Effective length of database: 533
Effective search space: 260637
Effective search space used: 260637
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.3 bits)
S2: 27 (15.0 bits)