Query= PFB0830w Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) Ribosomal
protein S26e, putative
(107 letters)
>YGL189C RPS26A SGDID:S000003157, Chr VII from 148594-148235,
reverse complement, Verified ORF, "Protein component of
the small (40S) ribosomal subunit; nearly identical to
Rps26Bp and has similarity to rat S26 ribosomal
protein"
Length = 119
Score = 111 bits (278), Expect = 2e-30
Identities = 51/81 (62%), Positives = 61/81 (75%)
Query: 1 MPKKRRNGGRSKHNRGHVNPLRCSNCGRCVPKDKAIKRFNIRNIVDTSAQRDIKEASVYS 60
MPKKR + GR+K RGHV P+RC NC + +PKDKAIKR IRNIV+ +A RD+ EASVY
Sbjct: 1 MPKKRASNGRNKKGRGHVKPVRCVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYP 60
Query: 61 TFQLPKLYIKQCYCVSCAIHS 81
+ LPK Y K YCVSCAIH+
Sbjct: 61 EYALPKTYNKLHYCVSCAIHA 81
Score = 11.9 bits (19), Expect = 2.6
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 12 KHNRGHVNPLRCSNCGRCVPKDKAIK 37
+ NR R + + P D A K
Sbjct: 92 RKNRAPPQRPRFNRENKVSPADAAKK 117
Lambda K H
0.321 0.133 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 107
Length of database: 119
Length adjustment: 12
Effective length of query: 95
Effective length of database: 107
Effective search space: 10165
Effective search space used: 10165
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.4 bits)
S2: 14 (10.0 bits)