Query= PFB0860c Pf Annotation|Plasmodium_falciparum_TIGR|(protein coding) RNA helicase, putative (562 letters)
>FBgn0032919 type=protein;
           loc=2L:join(21143306..21143503,21143564..21143822,
           21144012..21145078); ID=FBpp0080997; name=CG9253-PA;
           parent=FBgn0032919,FBtr0081468;
           dbxref=FlyBase:FBpp0080997,
           FlyBase_Annotation_IDs:CG9253-PA,GB_protein:AAF53963.1,
           GB_protein:AAF53963;
           MD5=83cfae77a795bb55176cfd0864682226; release=r5.1;
           species=Dmel; length=507;
          Length = 507

 Score =  411 bits (1057), Expect = e-119
 Identities = 209/432 (48%), Positives = 299/432 (69%), Gaps = 4/432 (0%)

Query: 123 KNKNHDNSFHNNDD--VKNGEVKNLVTNEEREKQNVTFEDLNICEEILESIKELGWKKPT 180
           + ++ DN+    D     +GE      ++  E+Q +T++DL + E + ++  EL WK P+
Sbjct: 26  EQEDEDNNHKEGDSEAALSGEDDKGSEDDAAEEQKLTWKDLGLNEALCQACDELKWKAPS 85

Query: 181 EIQREILPHAFLKKDIIGLSETGSGKTACFIIPILQDLKVNKQSFYALVISPTRELCIQI 240
           +IQRE +P A   KD+IGL+ETGSGKT  F +PIL  L  N Q ++ALV++PTREL  QI
Sbjct: 86  KIQREAIPVALQGKDVIGLAETGSGKTGAFALPILHALLENPQRYFALVLTPTRELAFQI 145

Query: 241 SQNFQALGMNLLINICTIYGGVDIVTQSLNLAKKPNVIVSTPGRILDHLNNTKGFNLKNL 300
            + F+ALG  + I  C + GG+D+V Q L LAKKP++I++TPGR++DHL N KGFNLK +
Sbjct: 146 GEQFEALGSGIGIKCCVVVGGMDMVAQGLQLAKKPHIIIATPGRLVDHLENMKGFNLKAI 205

Query: 301 KYLVFDEADKLLSQDFESSINKLLLILPPNRITFLFSATMTKNVAKLKKACLKNPVKVEV 360
           KYLV DEAD++L+ DFE  ++K+L +LP  R TFLFSATMTK V KL++A LK+PVKVEV
Sbjct: 206 KYLVMDEADRILNMDFEVELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVKVEV 265

Query: 361 SNKYSTVSTLIETYIFLPLKYKYTYLSSLCFHYQTRNIIIFTNTCATAQKLNFFCRNLGL 420
           SNKY TV  L ++Y+F+P+KYK  YL  +       + +IF +TC    K     R LGL
Sbjct: 266 SNKYQTVEQLQQSYLFIPVKYKDVYLVHILNELAGNSFMIFCSTCNNTVKTALMLRALGL 325

Query: 421 KSICLHGKLTQNQRLSSLNSFKVNKYNILISTQVGARGLDLQDIKIVINFDI-CSCKEYI 479
            +I LHG+++QN+RL++LN FK    +ILIST V +RGLD+  + +V+NFDI    K+YI
Sbjct: 326 AAIPLHGQMSQNKRLAALNKFKAKNRSILISTDVASRGLDIPHVDVVVNFDIPTHSKDYI 385

Query: 480 HRVGRTARAGRSGKSITFVTQYDVENFLAIEKQLNKKIDKFTDLDENDVLLYHEQTIEAL 539
           HRVGRTARAGRSGK+IT V+QYD+E +  IE  L K++  +   +E++V+   E+  EA 
Sbjct: 386 HRVGRTARAGRSGKAITLVSQYDIELYQRIEHLLGKQLTLY-KCEEDEVMALQERVAEAQ 444

Query: 540 RLSEIEMKENQE 551
           R +++E+K+ ++
Sbjct: 445 RTAKLELKDLED 456
Lambda     K      H
   0.318    0.135    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 601
Number of extensions: 23
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 507
Length adjustment: 35
Effective length of query: 527
Effective length of database: 472
Effective search space:   248744
Effective search space used:   248744
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)