Query= PFB0865w Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) small nuclear
ribonucleoprotein, putative
(101 letters)
>FBgn0037434 type=protein;
loc=3R:complement(2171001..2171358,2171493..2171494);
ID=FBpp0081234; name=CG1249-PA;
parent=FBgn0037434,FBtr0081737;
dbxref=FlyBase:FBpp0081234,
FlyBase_Annotation_IDs:CG1249-PA,GB_protein:AAF54135.1,
GB_protein:AAF54135;
MD5=307e4daca795befba66ab64f080dbea8; release=r5.1;
species=Dmel; length=119;
Length = 119
Score = 107 bits (268), Expect = 3e-29
Identities = 57/106 (53%), Positives = 73/106 (68%), Gaps = 7/106 (6%)
Query: 2 KSEVTIEENRDNPED----GPLGLLSECVKDNAQVLINCRNNRKILGRVKAFDRHCNLLL 57
KSE+T EE E+ GPL +L++ VK+N QVLINCRNN+K+LGRVKAFDRHCN++L
Sbjct: 7 KSELTPEELARQEEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFDRHCNMVL 66
Query: 58 TGVREIWVEVV---XXXXXXXXXXXXRYISILFLRGDSVILILRNP 100
V+E+W E+ R+IS +FLRGDSVIL+LRNP
Sbjct: 67 ENVKEMWTELPRTGKGKKKVKPVNKDRFISKMFLRGDSVILVLRNP 112
Lambda K H
0.323 0.142 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 65
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 101
Length of database: 119
Length adjustment: 12
Effective length of query: 89
Effective length of database: 107
Effective search space: 9523
Effective search space used: 9523
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.3 bits)
S2: 14 (10.0 bits)