Query= PFB0885w Pf
Annotation|Plasmodium_falciparum_TIGR|(protein coding) 40S ribosomal
protein S30, putative
(58 letters)
>YOR182C RPS30B SGDID:S000005708, Chr XV from
678794-678792,678380-678192, reverse complement,
Verified ORF, "Protein component of the small (40S)
ribosomal subunit; nearly identical to Rps30Ap and has
similarity to rat S30 ribosomal protein"
Length = 63
Score = 67.4 bits (163), Expect = 2e-17
Identities = 36/58 (62%), Positives = 41/58 (70%), Gaps = 4/58 (6%)
Query: 1 MGKVHGSLARAGKVKNQTPKVPKLDKKKRLTGRAKKRQLYNRRFSD----NGGRKKGP 54
M KVHGSLARAGKVK+QTPKV K +K K+ GRA KR LY RRF + NG R+ P
Sbjct: 1 MAKVHGSLARAGKVKSQTPKVEKTEKPKKPKGRAYKRLLYTRRFVNVTLVNGKRRMNP 58
Lambda K H
0.311 0.130 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 58
Length of database: 63
Length adjustment: 4
Effective length of query: 54
Effective length of database: 59
Effective search space: 3186
Effective search space used: 3186
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 10 ( 4.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 10 ( 7.4 bits)
S2: 10 ( 8.5 bits)