Query= PFC0200w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S Ribosomal
protein L44, putative
(104 letters)
>FBgn0031980 type=protein;
loc=2L:complement(8041988..8042125,8042440..8042613,
8042823..8042825); ID=FBpp0079168; name=RpL36A-PA;
parent=FBgn0031980,FBtr0079546;
dbxref=FlyBase:FBpp0079168,
FlyBase_Annotation_IDs:CG7424-PA,GB_protein:AAF52596.2,
GB_protein:AAF52596;
MD5=61c3da38bf53d806d267c02a4756c096; release=r5.1;
species=Dmel; length=104;
Length = 104
Score = 119 bits (298), Expect = 1e-32
Identities = 56/100 (56%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
Query: 1 MVNVPKTRKTYCSNKCKKHTMHKVSQYKKGKERLSSLGRRRYDMKQKGFGGQXXXXXXXX 60
MVNVPK R+T+C KCK H +HKV+QYKK KER + GRRRYD KQ+GFGGQ
Sbjct: 1 MVNVPKQRRTFCK-KCKVHKLHKVTQYKKSKERKGAQGRRRYDRKQQGFGGQTKPIFRKK 59
Query: 61 XXXXXXIVLKLECTKCKKKRFQTMKRCKTFEMGADKKKKG 100
IVL++ECT+CK ++ +KRCK FE+G DKK+KG
Sbjct: 60 AKTTKKIVLRMECTECKYRKQTPLKRCKHFELGGDKKRKG 99
Lambda K H
0.320 0.132 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 109
Number of extensions: 7
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 104
Length adjustment: 11
Effective length of query: 93
Effective length of database: 93
Effective search space: 8649
Effective search space used: 8649
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.4 bits)
S2: 14 (10.0 bits)