Query= PFC0290w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S23, putative
(145 letters)
>FBgn0033912 type=protein;
loc=2R:complement(10102940..10103207,10103456..10103615,
10104035..10104038); ID=FBpp0086701; name=RpS23-PA;
parent=FBgn0033912,FBtr0087575;
dbxref=FlyBase:FBpp0086701,
FlyBase_Annotation_IDs:CG8415-PA,GB_protein:AAF58277.2,
GB_protein:AAF58277;
MD5=e61e7f18ffb2c6f72e0b266cd817f7b8; release=r5.1;
species=Dmel; length=143;
Length = 143
Score = 218 bits (555), Expect = 3e-62
Identities = 105/142 (73%), Positives = 118/142 (83%)
Query: 4 GKPSGXXXXXXXXXXXXXXXWADKSYKKSHLGTRWKSNPFRGSSHAKGIVVEKVAIEAKQ 63
GKP G WADK YKK+HLGTRWK+NPF G+SHAKGIV+EKV +EAKQ
Sbjct: 2 GKPRGLRTARKHVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQ 61
Query: 64 PNSAYRKCVRVQLIKNGKKITAFVPGDGCLNFIDENDEVLVSGFGRSGHSVGDLPGVKFK 123
PNSA RKCVRVQLIKNGKKITAFVP DG LN+I+ENDEVLV+GFGR GH+VGD+PGV+FK
Sbjct: 62 PNSAIRKCVRVQLIKNGKKITAFVPRDGSLNYIEENDEVLVAGFGRKGHAVGDIPGVRFK 121
Query: 124 VVKVARVSLLALFKEKKEKPRS 145
VVKVA VSLLAL+KEKKE+PRS
Sbjct: 122 VVKVANVSLLALYKEKKERPRS 143
Lambda K H
0.315 0.134 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 129
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 145
Length of database: 143
Length adjustment: 16
Effective length of query: 129
Effective length of database: 127
Effective search space: 16383
Effective search space used: 16383
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.2 bits)
S2: 16 (10.8 bits)