Query= PFC0295c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S12, putative
(141 letters)
>FBgn0014027 type=protein;
loc=3L:join(13016609..13016625,13016832..13016966,
13017470..13017737); ID=FBpp0075614; name=RpS12-PC;
parent=FBgn0014027,FBtr0075880;
dbxref=GB_protein:AAN11844.1,FlyBase:FBpp0075614,
FlyBase_Annotation_IDs:CG11271-PC,
FlyBase_Annotation_IDs:CG11271-PA;
MD5=f8fcdf5dd5e5673f0a8bc8ae4c391d90; release=r5.1;
species=Dmel; length=139;
Length = 139
Score = 100 bits (250), Expect = 7e-27
Identities = 52/130 (40%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
Query: 1 MSDVESADNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVCFLS 60
M+DV+ + D TA+Q+V+K + + DGL GI + K+++ ++A +C L+
Sbjct: 1 MADVDVDVPSAAPVLDGAMDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCILA 60
Query: 61 DVCSEPAYKKLITTLCAEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGASSVAVV 120
+ EP YKKL+T LC E IPL V + K LG W+GL K+D EG RK+ G S V +
Sbjct: 61 ESFDEPNYKKLVTALCNEHQIPLIRVDSHKK-LGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
Query: 121 DFGEDSAEKD 130
DFGE++ D
Sbjct: 120 DFGEETPALD 129
Lambda K H
0.315 0.131 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 139
Length adjustment: 15
Effective length of query: 126
Effective length of database: 124
Effective search space: 15624
Effective search space used: 15624
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.2 bits)
S2: 16 (10.8 bits)