Query= PFC0295c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S12, putative
(141 letters)
>YOR369C RPS12 SGDID:S000005896, Chr XV from 1028623-1028192,
reverse complement, Verified ORF, "Protein component of
the small (40S) ribosomal subunit; has similarity to rat
ribosomal protein S12"
Length = 143
Score = 87.0 bits (214), Expect = 1e-22
Identities = 55/138 (39%), Positives = 77/138 (55%), Gaps = 6/138 (4%)
Query: 1 MSDVESA---DNNVVVEEKAVFDNVTAIQKVIKNAHVHDGLKIGIREVIKSIESQEAKVC 57
MSDVE VVE+ A A++ V++ A VHDGL G+RE K++ EA +
Sbjct: 1 MSDVEEVVEVQEETVVEQTAEVTIEDALKVVLRTALVHDGLARGLRESTKALTRGEALLV 60
Query: 58 FLSDVCSEPAYKKLITTLC--AEKNIPLFMVQNDSKDLGHWAGLFKLDNEGNARKIIGAS 115
L +E KL+ L E +PL V D+K LG WAGL K+D EGNARK++GAS
Sbjct: 61 VLVSSVTEANIIKLVEGLANDPENKVPLIKVA-DAKQLGEWAGLGKIDREGNARKVVGAS 119
Query: 116 SVAVVDFGEDSAEKDFLL 133
V V ++G ++ E ++
Sbjct: 120 VVVVKNWGAETDELSMIM 137
Lambda K H
0.315 0.131 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 141
Length of database: 143
Length adjustment: 16
Effective length of query: 125
Effective length of database: 127
Effective search space: 15875
Effective search space used: 15875
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.2 bits)
S2: 16 (10.8 bits)