Query= PFC0300c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L7, putative
(257 letters)
>YPL198W RPL7B SGDID:S000006119, Chr XVI from
173151-173161,173571-173664,174072-174701, Verified ORF,
"Protein component of the large (60S) ribosomal subunit,
nearly identical to Rpl7Ap and has similarity to E. coli
L30 and rat L7 ribosomal proteins; contains a conserved
C-terminal Nucleic acid Binding Domain (NDB2)"
Length = 244
Score = 167 bits (423), Expect = 2e-46
Identities = 82/182 (45%), Positives = 119/182 (65%), Gaps = 4/182 (2%)
Query: 75 KREARKNNCFYREAEKKVVFVIRLKGVNKLPPKVRSVFRLLRLLQVHNGVFVKVNKATKE 134
KR+A+ +Y EA+ K+VFV+R+KG+NK+PPK R V +LLRL ++++G FVKV KAT E
Sbjct: 66 KRDAKAAGSYYVEAQHKLVFVVRIKGINKIPPKPRKVLQLLRLTRINSGTFVKVTKATLE 125
Query: 135 MLKIVEPYVTYGYPTLSTVRKLLXXXXXXXXXXXXXXXXXXIQDNADISKHLGKYNVHGI 194
+LK++EPYV YGYP+ ST+R+L+ + DNA I +LGKY + I
Sbjct: 126 LLKLIEPYVAYGYPSYSTIRQLV----YKRGFGKINKQRVPLSDNAIIEANLGKYGILSI 181
Query: 195 EDMVYQLYTCGPVFKKVNNFLWAFKLKPPRKGFKAKRHAFNEPRPGDWGNREAHINELIN 254
+D+++++ T GP FK+ NNFLW FKL P G+ R + + G +GNRE IN+L+
Sbjct: 182 DDLIHEIITVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGSFGNREEFINKLVK 241
Query: 255 RM 256
M
Sbjct: 242 AM 243
Lambda K H
0.321 0.137 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 155
Number of extensions: 7
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 244
Length adjustment: 24
Effective length of query: 233
Effective length of database: 220
Effective search space: 51260
Effective search space used: 51260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.6 bits)
S2: 21 (12.7 bits)