Query= PFC0350c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) T-complex
protein eta subunit, putative
(539 letters)
>YJL111W CCT7 SGDID:S000003647, Chr X from 207795-209447, Verified
ORF, "Subunit of the cytosolic chaperonin Cct ring
complex, related to Tcp1p, required for the assembly of
actin and tubulins in vivo"
Length = 550
Score = 513 bits (1321), Expect = e-150
Identities = 268/523 (51%), Positives = 370/523 (70%), Gaps = 5/523 (0%)
Query: 9 IVLLKEGTDTAQGRSQIIRNINACQIIVDIVKTTLGPRGMDKLIYTERD-VTITNDGATV 67
IV+LKEGTD +QG+ QII NINAC + + +K TLGP G D LI T TI+NDGAT+
Sbjct: 10 IVVLKEGTDASQGKGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATI 69
Query: 68 MNLLNISHPAASILVDIAKSQDDEVGDGTTSVVVVAGELLNEAKGLLNDGIEPNMIIDGF 127
+ LL++ HPAA LVDI+++QD EVGDGTTSV ++AGEL+ EAK L +GI ++I+ G+
Sbjct: 70 LKLLDVVHPAAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGY 129
Query: 128 RNACNVAINKLNELSLNFSNKNEEEKRSILLKCAQTALNSKLVSNHKEFFGELVVNAVYK 187
R A ++A+ K+NEL+++ +++ + R +L +CA+TA++SKL+ N+ +FF ++ V+AV
Sbjct: 130 RKAVSLAVEKINELAVDITSE-KSSGRELLERCARTAMSSKLIHNNADFFVKMCVDAVLS 188
Query: 188 LGDN-LDKSNIGIKKVTGGSCLDTQLIYGVAFKKTFSYAGFEQQPKKFINPKIXXXXXXX 246
L N LD IGIKK+ GG+ ++ I GVAFKKTFSYAGFEQQPKKF NPKI
Sbjct: 189 LDRNDLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQQPKKFNNPKILSLNVEL 248
Query: 247 XXXXXXXXXXXRIENPNEYNSIVQAEWDIIFKKLNLIKDCGANIVLSKLPIGDIATQFFA 306
R+E+ +Y +IV AEW +IF+KL +++ GANIVLSKLPIGD+ATQFFA
Sbjct: 249 ELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFA 308
Query: 307 DHDIFCAGRVEDADLKRTANATGALVQTSLFNLNDDVLGTCGVFEEVQIGNERYNIFKEC 366
D +IFCAGRV D+ R A G +Q++ ++ + LGTC +FEE+QIG+ERYN+F+ C
Sbjct: 309 DRNIFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGC 368
Query: 367 LKTKSVTIILRGGAKQFIEEVERSINDAIMIVLRCITNSEIVPGAGSIEMQLSKYLRIYS 426
+ K+ T++LRGGA+Q I EVERS++DAIMIV R + N IV G G+ EM++SK LR YS
Sbjct: 369 PQAKTCTLLLRGGAEQVIAEVERSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYS 428
Query: 427 RSICNKEQIVLFSFAKALESIPRHLSHNAGYDSTDILNKLRKKHSEQTSDIWYGVDCMEG 486
++I K+Q+++ +FAKALE IPR L NAG+D+ +ILNKLR HS+ + WYGV
Sbjct: 429 KTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRLAHSK--GEKWYGVVFETE 486
Query: 487 DIINAYDNCIFEVTKIKRNVIYSATEAACLILSIDETIKNPSS 529
+I + + ++E +K N + SATEA LILS+DETI N S
Sbjct: 487 NIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGS 529
Score = 16.9 bits (32), Expect = 2.1
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 57 DVTITNDGATVMN 69
D TITN G+ N
Sbjct: 521 DETITNKGSESAN 533
Lambda K H
0.318 0.135 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 678
Number of extensions: 29
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 539
Length of database: 550
Length adjustment: 35
Effective length of query: 504
Effective length of database: 515
Effective search space: 259560
Effective search space used: 259560
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.3 bits)
S2: 27 (15.0 bits)