Query= PFC0400w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S Acidic
ribosomal protein P2
(112 letters)
>YDR382W RPP2B SGDID:S000002790, Chr IV from 1239483-1239815,
Verified ORF, "Ribosomal protein P2 beta, a component
of the ribosomal stalk, which is involved in the
interaction between translational elongation factors
and the ribosome; regulates the accumulation of P1
(Rpp1Ap and Rpp1Bp) in the cytoplasm"
Length = 110
Score = 59.7 bits (143), Expect = 1e-14
Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGK-SCHELITDGL 61
MKY+AAYL+ V GGN PS ++K V+ +V A+V++ +N + SL+GK S E+I +G
Sbjct: 1 MKYLAAYLLLVQGGNAAPSAADIKAVVESVGAEVDEARINELLSSLEGKGSLEEIIAEGQ 60
Query: 62 KKLQNIGGG 70
KK + G
Sbjct: 61 KKFATVPTG 69
Lambda K H
0.316 0.138 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 4
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 112
Length of database: 110
Length adjustment: 12
Effective length of query: 100
Effective length of database: 98
Effective search space: 9800
Effective search space used: 9800
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.2 bits)
S2: 14 (10.0 bits)