Query= PFC0400w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S Acidic
ribosomal protein P2
(112 letters)
>YOL039W RPP2A SGDID:S000005399, Chr XV from 254296-254616,
Verified ORF, "Ribosomal protein P2 alpha, a component
of the ribosomal stalk, which is involved in the
interaction between translational elongation factors
and the ribosome; regulates the accumulation of P1
(Rpp1Ap and Rpp1Bp) in the cytoplasm"
Length = 106
Score = 55.1 bits (131), Expect = 2e-13
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 3 MKYVAAYLMCVLGGNENPSTKEVKNVLGAVNADVEDEVLNNFIDSLKGKSCHELITDGLK 62
MKY+AAYL+ GN +TK +K +L +V ++EDE +++ + +L+GKS ELIT+G +
Sbjct: 1 MKYLAAYLLLNAAGNTPDATK-IKAILESVGIEIEDEKVSSVLSALEGKSVDELITEGNE 59
Query: 63 KL 64
KL
Sbjct: 60 KL 61
Lambda K H
0.316 0.138 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 112
Length of database: 106
Length adjustment: 12
Effective length of query: 100
Effective length of database: 94
Effective search space: 9400
Effective search space used: 9400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 14 ( 6.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 14 ( 9.2 bits)
S2: 14 (10.0 bits)