Query= PFC0520w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 26S
proteasome regulatory subunit S14, putative
(304 letters)
>FBgn0028693 type=protein; loc=3L:16576200..16576994;
ID=FBpp0075068; name=Rpn12-PA;
parent=FBgn0028693,FBtr0075308;
dbxref=FlyBase:FBpp0075068,
FlyBase_Annotation_IDs:CG4157-PA,GB_protein:AAF49445.1,
GB_protein:AAF49445;
MD5=150bfa1b0cd3dc7bbb9373212a25ccc2; release=r5.1;
species=Dmel; length=264;
Length = 264
Score = 117 bits (294), Expect = 2e-31
Identities = 74/226 (32%), Positives = 121/226 (53%), Gaps = 13/226 (5%)
Query: 81 QKDIRELLIVRGILEKGVIISIRNKDIKSFNIYIAQLFIYYFDYKDILPKSKKQNAIVGL 140
Q ++L++ R +LE V S+ +KD+ +F Y+AQL YY+DY I+ +S+ + ++GL
Sbjct: 50 QSSKKQLILARSVLEVAVEHSVLSKDLLAFERYMAQLKCYYYDYAKIIGESESKYKLLGL 109
Query: 141 YLLYLLASNSIGDFHMTLEILPLE--DHNDIYIKYVLNVEQNIMDGFFHHVLTKKENIPL 198
LLYLL+ N + DFH LE+L ++ HN +I+ +L +EQ IM+G ++ + K +P+
Sbjct: 110 NLLYLLSGNRVSDFHTELELLSVDVIQHNQ-FIRPILALEQYIMEGRYNKIFQAKSTVPV 168
Query: 199 YLYESFMDKLYTTIRFKLIDCIFASTNSIHLLYACELLKLSNQQNLNDFIIQYNEAKNNQ 258
+Y FMD L T+R ++ CI S + I A + L L + F +
Sbjct: 169 EVYSYFMDLLLETVRDEIGACIEKSYDKISAKDAAKRLNLRVPDEIKAFGAKRQWKLEAS 228
Query: 259 GEYNAVCEIKDNHIVCKNQTIAVQQLPSLEIINNSIGYATELERIV 304
G+Y+ D + K + LPS E+ + YA +LE IV
Sbjct: 229 GDYS----FTDRSVKPK------ELLPSEELAEQVLSYARDLEMIV 264
Lambda K H
0.323 0.141 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 183
Number of extensions: 10
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 2
Length of query: 304
Length of database: 264
Length adjustment: 26
Effective length of query: 278
Effective length of database: 238
Effective search space: 66164
Effective search space used: 66164
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.6 bits)
S2: 21 (12.7 bits)