Query= PFC0535w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 60S ribosomal
protein L26, putative
(126 letters)
>YGR034W RPL26B SGDID:S000003266, Chr VII from
555933-555957,556312-556676, Verified ORF, "Protein
component of the large (60S) ribosomal subunit, nearly
identical to Rpl26Ap and has similarity to E. coli L24
and rat L26 ribosomal proteins; binds to 5.8S rRNA"
Length = 129
Score = 119 bits (297), Expect = 2e-32
Identities = 54/108 (50%), Positives = 81/108 (75%)
Query: 17 AHFTAPAGLRRKIMSSKLSKELRLKYKTRSLPVRKDDEVLICRGHNHGREGKVVKINRKR 76
A+FTAP+ RR ++S+ LSKELR +Y ++LP+R+DDEVL+ RG G+EGK+ + R +
Sbjct: 20 AYFTAPSSERRVLLSAPLSKELRAQYGIKALPIRRDDEVLVVRGSKKGQEGKISSVYRLK 79
Query: 77 YKIYVERVTREKVNGESTFIGIHPSNVVLTKLKVDKNRKKILDRKAAK 124
+ + V++VT+EKVNG S I +HPS +V+TKL +DK+RK ++ RK K
Sbjct: 80 FAVQVDKVTKEKVNGASVPINLHPSKLVITKLHLDKDRKALIQRKGGK 127
Lambda K H
0.318 0.134 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 79
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 126
Length of database: 129
Length adjustment: 14
Effective length of query: 112
Effective length of database: 115
Effective search space: 12880
Effective search space used: 12880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 6.9 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 15 ( 9.8 bits)
S2: 15 (10.4 bits)