Query= PFC0735w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal
protein S15A, putative
(130 letters)
>YLR367W RPS22B SGDID:S000004359, Chr XII from
856441-856573,857057-857316, Verified ORF, "Protein
component of the small (40S) ribosomal subunit; nearly
identical to Rps22Ap and has similarity to E. coli S8
and rat S15a ribosomal proteins"
Length = 130
Score = 189 bits (479), Expect = 2e-53
Identities = 91/130 (70%), Positives = 107/130 (82%)
Query: 1 MVRMSVLADCLKTINNAEKRGRRQVLIRPSSKVVIKFLQYMQKKGYIGSFEIVDDHRSGK 60
M R SVLAD L INNAEK G+RQVL+RPSSKV+IKFLQ MQK GYIG FE +DDHRSGK
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRSGK 60
Query: 61 IVVNLLGRINKCAVISPRYDVKLDEIEKIITSILPSRLFGHLILTTPYGIMDHEEARRKH 120
IVV L GR+NKC VISPR++VK+ +IEK ++LP+R FG++ILTT GIMDHEEARRKH
Sbjct: 61 IVVQLNGRLNKCGVISPRFNVKIGDIEKWTANLLPARQFGYVILTTSAGIMDHEEARRKH 120
Query: 121 TGGKVLGFFF 130
GK+LGF +
Sbjct: 121 VSGKILGFVY 130
Lambda K H
0.326 0.143 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 105
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 130
Length of database: 130
Length adjustment: 14
Effective length of query: 116
Effective length of database: 116
Effective search space: 13456
Effective search space used: 13456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 16 (10.3 bits)
S2: 16 (10.8 bits)