Query= PFC0745c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) proteasome
component C8, putative
(252 letters)
>YOR362C PRE10 SGDID:S000005889, Chr XV from 1018744-1017878,
reverse complement, Verified ORF, "20S proteasome
alpha-type subunit"
Length = 288
Score = 134 bits (337), Expect = 2e-36
Identities = 75/253 (29%), Positives = 135/253 (53%), Gaps = 11/253 (4%)
Query: 1 MAGLSAGYDLSVSTFSPDGRLYQVEYIYKSINNNNTALCLECKDGIICCCINSNMDKNKM 60
M + GYDLS S FSPDGR +QVEY K++ N T++ ++C DG++ + +K+
Sbjct: 1 MTSIGTGYDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAV--EKLITSKL 58
Query: 61 IKKNSYNRIYHVNNNIIITYSGFDGDARNIIDRARSEANTYYYNFHTNIPLHILVNRISL 120
+ +I V+ +I YSG D R++++R R EA ++ + T IP+ +R+
Sbjct: 59 LVPQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQ 118
Query: 121 YIHAYTLYWHMRPFAASIIISSFNEKDKGDIYCIEPNGACYKYSGIVIGKNKEMFKTEIE 180
Y+ A+TLY +RPF S I +K+ +Y +EP+G+ + Y G GK ++ K E+E
Sbjct: 119 YVQAHTLYNSVRPFGVSTIFGGV-DKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELE 177
Query: 181 K---KDYKDINVRDAIEDIYKFILTSDDHMNKNNLQNLVNFSWICKESSYEFQNIHEEIL 237
K + ++ R+A++ K I + + + + + + SW S E +H+ +
Sbjct: 178 KLVDHHPEGLSAREAVKQAAKIIYLAHEDNKEKDFE--LEISWC---SLSETNGLHKFVK 232
Query: 238 TPALNKAVEYIEK 250
L +A+++ +K
Sbjct: 233 GDLLQEAIDFAQK 245
Lambda K H
0.320 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 216
Number of extensions: 12
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 288
Length adjustment: 25
Effective length of query: 227
Effective length of database: 263
Effective search space: 59701
Effective search space used: 59701
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.6 bits)
S2: 21 (12.7 bits)