Query= PFC0870w Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) elongation
factor 1 (EF-1), putative
(156 letters)
>YAL003W EFB1 SGDID:S000000003, Chr I from
142176-142255,142622-143162, Verified ORF, "Translation
elongation factor 1 beta; stimulates nucleotide exchange
to regenerate EF-1 alpha-GTP for the next elongation
cycle; part of the EF-1 complex, which facilitates
binding of aminoacyl-tRNA to the ribosomal A site"
Length = 206
Score = 75.9 bits (185), Expect = 4e-19
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
Query: 26 KIDQANTKKPKKK-EVINKSSLIIDIKPYGENTDLDEVLKLVKNITMEGLTWGKAHKKTP 84
+I N KK K + KS + +D+KP+ + T+L+E++ VK I MEGLTWG AH+ P
Sbjct: 102 RIAAYNAKKAAKPAKPAAKSIVTLDVKPWDDETNLEEMVANVKAIEMEGLTWG-AHQFIP 160
Query: 85 FAFGLFKLQVSCVIVDDLVNTDELIETIE 113
FG+ KLQ++CV+ DD V+ D+L ++IE
Sbjct: 161 IGFGIKKLQINCVVEDDKVSLDDLQQSIE 189
Lambda K H
0.313 0.134 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 72
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 206
Length adjustment: 19
Effective length of query: 137
Effective length of database: 187
Effective search space: 25619
Effective search space used: 25619
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 18 (11.0 bits)
S2: 18 (11.5 bits)