Query= PFC1020c Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) 40S ribosomal protein S3A, putative (262 letters)
>YLR441C RPS1A SGDID:S000004433, Chr XII from 1018905-1018138,
           reverse complement, Verified ORF, "Ribosomal protein 10
           (rp10) of the small (40S) subunit; nearly identical to
           Rps1Bp and has similarity to rat S3a ribosomal protein"
          Length = 255

 Score =  213 bits (541), Expect = 4e-60
 Identities = 112/222 (50%), Positives = 145/222 (65%), Gaps = 1/222 (0%)

Query: 28  EWYDLKAPKMFLVRNFGKTLVTKTIGKKLATDSLKGRIYEVNLADLNNDEDQAHKKIKLS 87
           EW+D+KAP  F  RN GKTLV K+ G K A+D+LKGR+ EV LADL   ED + +KIKL 
Sbjct: 28  EWFDIKAPSTFENRNVGKTLVNKSTGLKSASDALKGRVVEVCLADLQGSEDHSFRKIKLR 87

Query: 88  CDHIINRDCYTDFCGLSITRDKLCSLIRKGYTLIEGHTDVKTLDNYHLRMFCIAFTKKRQ 147
            D +  ++  T+F G+  T DKL S++RK  TLIE +  VKT D+Y LR+F IAFT+K+ 
Sbjct: 88  VDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAIAFTRKQA 147

Query: 148 NQTKSTCYAQTSQIKKIRKKMVDIMTAEASKVLLKDLVKKFIPESIGKEIEKQCKKIYPL 207
           NQ K   YAQ+S I+ IRK + +I+T E     L  L  K IPE I KEIE   K I+PL
Sbjct: 148 NQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENATKDIFPL 207

Query: 208 QNVLIRKVKILKRPKLDISKLMELHTDPK-EESGKNVNALPE 248
           QN+ +RKVK+LK+PK D+  LM LH +   EE GK V    +
Sbjct: 208 QNIHVRKVKLLKQPKFDVGALMALHGEGSGEEKGKKVTGFKD 249
Lambda     K      H
   0.319    0.134    0.383 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 196
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 262
Length of database: 255
Length adjustment: 24
Effective length of query: 238
Effective length of database: 231
Effective search space:    54978
Effective search space used:    54978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 21 (12.6 bits)
S2: 21 (12.7 bits)