Query= PFD0460c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) hypothetical
protein
(1010 letters)
>YBR034C HMT1 SGDID:S000000238, Chr II from 305976-304930, reverse
complement, Verified ORF, "Nuclear SAM-dependent mono-
and asymmetric arginine dimethylating methyltransferase
that modifies hnRNPs, including Npl3p and Hrp1p, thus
facilitating nuclear export of these proteins; required
for viability of npl3 mutants"
Length = 348
Score = 34.3 bits (77), Expect = 1e-05
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 8/76 (10%)
Query: 28 NFEWYGSYEDIKSIVYTCIRKRLNYSNDKDEDEISSSDVNKNCLLINTGCGNSNISNEFY 87
+++ YG +E++ + L+Y N I + D+ K+ ++++ GCG +S
Sbjct: 26 SYDHYGIHEEMLQDTV----RTLSYRNAI----IQNKDLFKDKIVLDVGCGTGILSMFAA 77
Query: 88 EDGFKHIINIDYSEVV 103
+ G KH+I +D S ++
Sbjct: 78 KHGAKHVIGVDMSSII 93
Score = 17.7 bits (34), Expect = 1.4
Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 803 LGGGTNVLSNIIKTIFHDYYIHFDIIEIDETVKKFYSL--FTDE 844
+G GT +LS + I D+ I E K+ L F+D+
Sbjct: 65 VGCGTGILSMFAAKHGAKHVIGVDMSSIIEMAKELVELNGFSDK 108
Score = 17.3 bits (33), Expect = 1.8
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 661 SIHEKHIEDNTLRNNLLN 678
SIH +ED+ ++ LN
Sbjct: 167 SIHLAGLEDSQYKDEKLN 184
Score = 16.9 bits (32), Expect = 2.4
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 221 YKQYDYKIFFDKAFLDSYLSCEKNEEDICKKNAQN 255
Y + IF+ LD+ E +C N +N
Sbjct: 281 YTHWKQTIFYFPDDLDAETGDTIEGELVCSPNEKN 315
Score = 15.8 bits (29), Expect = 5.4
Identities = 5/12 (41%), Positives = 7/12 (58%)
Query: 188 YDEIDRYKIHME 199
++ D Y IH E
Sbjct: 24 FNSYDHYGIHEE 35
Lambda K H
0.321 0.138 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 749
Number of extensions: 40
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 5
Length of query: 1010
Length of database: 348
Length adjustment: 37
Effective length of query: 973
Effective length of database: 311
Effective search space: 302603
Effective search space used: 302603
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 27 (15.4 bits)
S2: 27 (15.0 bits)