Query= PFD0770c Pf
Annotation|Plasmodium_falciparum_Sanger|(protein coding) ribosomal
protein l15, putative
(220 letters)
>YLR029C RPL15A SGDID:S000004019, Chr XII from 202591-201977,
reverse complement, Verified ORF, "Protein component of
the large (60S) ribosomal subunit, nearly identical to
Rpl15Bp and has similarity to rat L15 ribosomal protein;
binds to 5.8 S rRNA"
Length = 204
Score = 219 bits (557), Expect = 4e-62
Identities = 111/220 (50%), Positives = 142/220 (64%), Gaps = 17/220 (7%)
Query: 1 MGAYKYIQEIWKKKQSDAMHFLLRVRTWEYRGIRKMNVMICNKMHMQLPVVHRVSKPSRP 60
MGAYKY++E+ +KKQSD + FL RVR WEYR Q V+HR ++P+RP
Sbjct: 1 MGAYKYLEELQRKKQSDVLRFLQRVRVWEYR---------------QKNVIHRAARPTRP 45
Query: 61 DKARRLGYKAIQGFVIYXXXXXXXXXXXXXXXXXXHGKPKHQGVHKQKSTRNLKSVAEGK 120
DKARRLGYKA QGFVIY +GKP +QGV++ K R+L++ AE +
Sbjct: 46 DKARRLGYKAKQGFVIYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEER 105
Query: 121 VGKSICGNLRVLNSYWVGQDAVYKYYEVILVDPNHNAVRNNPKINWICNPVHKHRELRGL 180
VG+ NLRVLNSYWV QD+ YKY+EVILVDP H A+R + + NWIC+PVHKHRE RGL
Sbjct: 106 VGRR-AANLRVLNSYWVNQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREARGL 164
Query: 181 TSAGKKYRGLRVKGHLSAKSRPSIRANWKRRQLIKLRKCR 220
T+ GKK RG+ KGH ++ R WKR+ + L + R
Sbjct: 165 TATGKKSRGIN-KGHKFNNTKAGRRKTWKRQNTLSLWRYR 203
Lambda K H
0.322 0.136 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 213
Number of extensions: 11
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 204
Length adjustment: 21
Effective length of query: 199
Effective length of database: 183
Effective search space: 36417
Effective search space used: 36417
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 19 (11.7 bits)
S2: 19 (11.9 bits)