Query= PFD0975w Pf Annotation|Plasmodium_falciparum_Sanger|(protein coding) ROI kinase-like protein (581 letters)
>YNL207W RIO2 SGDID:S000005151, Chr XIV from 255354-256631, Verified
           ORF, "Essential serine kinase involved in the processing
           of the 20S pre-rRNA into mature 18S rRNA; has similarity
           to Rio1p"
          Length = 425

 Score =  243 bits (621), Expect = 9e-69
 Identities = 155/424 (36%), Positives = 234/424 (55%), Gaps = 38/424 (8%)

Query: 1   MKLDISCFSFLSRNEYRVLTAIEMGMRNHEYLSVSLISSIANLRKE-GIVSVXXXXXXXX 59
           MKLD S   +L+ +++RVL A+E G R+HE +   LI  I+ +R + G            
Sbjct: 1   MKLDTSHMRYLTTDDFRVLQAVEQGSRSHEVVPTPLIHQISGMRSQSGTNRAISDLAKLS 60

Query: 60  XISH-QNKKYDGYKLTYLGYDFLALRTFLKRGILKSIGNQIGVGKESDIYICKDVDDNLL 118
            IS  +N KYDGY+LTY G D+LAL+T L R  + S+GN IGVGKESDIY   D + N  
Sbjct: 61  LISKMRNVKYDGYRLTYNGIDYLALKTMLNRDTVYSVGNTIGVGKESDIYKVSDKNGNPR 120

Query: 119 CLKIHRLGRISFRTIKNNRDYYGK-KCFRNWLYLSRIAATKEYAYLKVLYENNFPVPKPH 177
            +KIHRLGR SF +++NNRDY  K     NW++LSR+AA KEY ++ +LY   F VP+P 
Sbjct: 121 VMKIHRLGRTSFHSVRNNRDYLKKSNQGANWMHLSRLAANKEYQFMSMLYSKGFKVPEPF 180

Query: 178 DINRHMIIMSYIKGYPLSHV-KLNNPYKIIDTLFNILVKFAKADIIHGDYNEFNILVDD- 235
           D +RH+++M  I+GYP+  + K  N  K+   L   +V  A + +IH D+NEFNI++ D 
Sbjct: 181 DNSRHIVVMELIEGYPMRRLRKHKNIPKLYSDLMCFIVDLANSGLIHCDFNEFNIMIKDK 240

Query: 236 --DEN---VTIIDFPQIVSLRHVNAKMYFERDINCVINHFFKKYKIKIQEYPLYEDVVLL 290
             DEN     +IDFPQ +S++H +A  YF+RD++C I  FFKK K+K +  P   D  +L
Sbjct: 241 LEDENDCGFVVIDFPQCISIQHQDADYYFQRDVDC-IRRFFKK-KLKYEPKP---DSSML 295

Query: 291 NKDKLNID--------ENDVTKQDDHLLLEVLQNDKLNYSSDATNNMDDA------PVHH 336
           + +             + DV + D+  L E++Q    +        ++ A       V++
Sbjct: 296 DTEGFGDGYKYAYPDFKRDVKRTDN--LDELVQASGFSKKHPGDRGLETAVESMRNAVYN 353

Query: 337 IDASLEKEETSEASNESTH-----MFELHMDNEKKHE--KDYITMDKEIINDTCDSKGDN 389
            D  +  +E  E + E  +      ++  +DNE   +  +D    + E I +   S  +N
Sbjct: 354 SDDDMSNDEAEEENGEGDYSEEDEYYDSELDNESSEDDSEDAQEEENERIIEALSSGVEN 413

Query: 390 MYTD 393
           +  D
Sbjct: 414 LKMD 417

 Score = 16.9 bits (32), Expect = 1.7
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query: 370 DYITMDKEIINDTCDSKGDNMYTDYDKPGYK 400
           DY+ +   +  DT  S G+ +    +   YK
Sbjct: 81  DYLALKTMLNRDTVYSVGNTIGVGKESDIYK 111
Lambda     K      H
   0.317    0.136    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 708
Number of extensions: 51
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 4
Length of query: 581
Length of database: 425
Length adjustment: 34
Effective length of query: 547
Effective length of database: 391
Effective search space:   213877
Effective search space used:   213877
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 26 (14.8 bits)
S2: 26 (14.6 bits)